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Os03g0100900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF862, eukaryotic domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.82 (0.0173) R2 : 0.453
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.837 (0.0432) R2dC : 0.451 R2C : 0.452
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0233 (0.0364) R2dN8 : 0.000633 R2N8 : 0.00121
σ : 0.326
deviance : 48.67
__
_____
C
peak time of C : 3.04
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
42.23 0.305 8.83 0.0316 0.896 -0.537 -0.0175 0.223 0.0114 3 85 1342 -- --
42.29 0.303 8.83 0.012 0.919 -0.534 -0.00376 -- 0.00928 2.91 85.35 1274 -- --
42.22 0.303 8.82 0.03 0.903 -0.539 -- 0.222 0.0112 2.97 85 1321 -- --
42.29 0.303 8.83 0.0105 0.92 -0.533 -- -- 0.0096 2.9 85.34 1272 -- --
56.85 0.351 8.82 -0.0107 -- -1.06 -- 0.58 0.0419 -- 104 149 -- --
48.55 0.327 8.83 -0.0605 0.838 -- -0.101 -- 0.0162 3.05 -- -- -- --
48.58 0.326 8.83 -0.0583 0.838 -- -- -- 0.0168 3.04 -- -- -- --
57.39 0.353 8.82 -0.027 -- -1.02 -- -- 0.0398 -- 120.1 138 -- --
42.29 0.303 8.83 -- 0.92 -0.533 -- -- 0.00938 2.91 85.59 1272 -- --
88.76 0.44 8.82 -0.0226 -- -- -- -- 0.0386 -- -- -- -- --
48.67 0.326 8.82 -- 0.837 -- -- -- 0.0233 3.04 -- -- -- --
57.41 0.353 8.82 -- -- -1.02 -- -- 0.0428 -- 131.5 138 -- --
88.77 0.44 8.82 -- -- -- -- -- 0.0411 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 41.31 humidity 60 4320 < th dose independent rect. 17 3
15 41.47 humidity 60 4320 > th dose independent rect. 17 13
17 41.48 humidity 60 4320 > th dose independent rect. 17 4
18 41.48 humidity 60 4320 > th dose independent rect. 17 6
19 41.48 humidity 60 4320 > th dose independent rect. 17 8
22 41.49 humidity 60 4320 > th dose independent rect. 17 2
30 41.72 humidity 50 4320 < th dose independent sin 12 NA
31 41.72 humidity 60 4320 < th dose dependent rect. 16 3
47 41.77 humidity 50 4320 < th dose independent rect. 15 2
48 41.78 humidity 50 4320 < th dose independent rect. 15 20
99 41.92 humidity 50 4320 > th dose independent sin 12 NA
102 41.95 humidity 70 1440 > th dose dependent rect. 11 2
103 41.96 humidity 50 4320 > th dose independent rect. 15 6
104 41.96 humidity 50 4320 > th dose independent rect. 15 8
105 41.96 humidity 50 4320 > th dose independent rect. 15 10
106 41.96 humidity 50 4320 > th dose independent rect. 15 15
108 41.96 humidity 50 4320 > th dose independent rect. 15 18
110 41.97 humidity 50 4320 > th dose independent rect. 15 2
128 42.02 humidity 70 1440 > th dose dependent rect. 9 5
132 42.03 humidity 80 720 < th dose dependent sin 12 NA
136 42.06 humidity 70 720 > th dose independent rect. 14 15
189 42.14 humidity 70 720 > th dose independent rect. 14 8
206 42.16 humidity 80 1440 < th dose independent rect. 6 8
210 42.17 humidity 80 1440 < th dose independent rect. 11 2
229 42.18 humidity 70 720 > th dose dependent rect. 8 14
251 42.21 humidity 80 1440 < th dose dependent rect. 15 21
258 42.23 humidity 80 720 < th dose dependent rect. 16 15
261 42.24 humidity 50 4320 > th dose independent rect. 15 22
263 42.24 humidity 50 720 > th dose dependent rect. 15 7
286 42.27 humidity 80 720 < th dose dependent rect. 16 12
292 42.29 humidity 80 1440 > th dose independent rect. 11 2
304 42.31 humidity 50 720 > th dose dependent rect. 17 2
343 42.39 humidity 70 720 > th dose independent rect. 14 19
345 42.40 humidity 70 720 > th dose independent sin 15 NA
357 42.40 humidity 80 1440 < th dose independent rect. 20 18
368 42.41 humidity 80 1440 < th dose independent sin 3 NA
410 42.43 humidity 90 720 < th dose dependent sin 17 NA
413 42.44 wind 3 43200 < th dose independent rect. 2 1
453 42.46 humidity 80 1440 > th dose independent rect. 6 8
471 42.46 humidity 90 720 < th dose dependent rect. 9 15
494 42.47 humidity 50 4320 < th dose dependent sin 11 NA
530 42.50 humidity 90 720 < th dose dependent rect. 9 19
531 42.50 humidity 90 720 < th dose dependent rect. 9 21
569 42.51 humidity 60 720 > th dose dependent sin 19 NA
611 42.53 humidity 90 1440 < th dose dependent rect. 4 18
640 42.55 humidity 80 1440 < th dose dependent no NA NA
653 42.55 humidity 80 1440 < th dose dependent rect. 6 23
660 42.56 humidity 80 720 > th dose independent rect. 10 12
682 42.56 humidity 90 1440 < th dose dependent rect. 3 16
691 42.56 humidity 80 1440 < th dose dependent rect. 6 21
695 42.56 humidity 80 1440 < th dose dependent rect. 4 22
699 42.56 humidity 80 1440 < th dose dependent rect. 1 23
705 42.57 humidity 50 4320 < th dose independent no NA NA
796 42.57 humidity 80 1440 < th dose independent rect. 17 21
834 42.57 humidity 90 720 < th dose dependent rect. 13 10
860 42.57 humidity 80 1440 < th dose dependent rect. 23 23
901 42.58 humidity 80 1440 < th dose dependent rect. 20 23
994 42.61 humidity 50 1440 > th dose dependent sin 23 NA
998 42.61 humidity 90 1440 < th dose dependent sin 0 NA