Os03g0100100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pectinesterase inhibitor domain containing protein.
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Os03g0100100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pectinesterase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 174.86 | 0.621 | 3.99 | 0.504 | 4.07 | -3.51 | 3.68 | -3.2 | -0.343 | 8.01 | 9.773 | 96 | 23 | -- |
| 177.55 | 0.621 | 3.95 | 0.753 | 4.46 | -3.83 | 1.62 | -- | -0.255 | 7.79 | 7.514 | 106 | 23.3 | -- |
| 180.71 | 0.626 | 3.95 | 0.938 | 4.93 | -4.18 | -- | 1.38 | -0.307 | 7.87 | 2.263 | 110 | 23.1 | -- |
| 184.56 | 0.633 | 3.94 | 0.809 | 5.19 | -4.48 | -- | -- | -0.296 | 7.87 | 2.517 | 110 | 23.2 | -- |
| 216.71 | 0.686 | 4.13 | 0.553 | -- | -1.63 | -- | -1.02 | -0.454 | -- | -43.97 | 931 | 18.9 | -- |
| 219.25 | 0.694 | 4.11 | 0.439 | 1.44 | -- | 1.45 | -- | -0.557 | 7.04 | -- | -- | -- | -- |
| 224.69 | 0.702 | 4.11 | 0.468 | 1.44 | -- | -- | -- | -0.56 | 7.09 | -- | -- | -- | -- |
| 220.15 | 0.691 | 4.12 | 0.635 | -- | -1.75 | -- | -- | -0.486 | -- | -30.09 | 988 | 19.4 | -- |
| 200.35 | 0.659 | 3.99 | -- | 4.38 | -3.59 | -- | -- | -0.425 | 7.89 | 3.6 | 107 | 23 | -- |
| 333.73 | 0.854 | 4.14 | 0.496 | -- | -- | -- | -- | -0.534 | -- | -- | -- | -- | -- |
| 230.46 | 0.71 | 4.12 | -- | 1.44 | -- | -- | -- | -0.612 | 7.07 | -- | -- | -- | -- |
| 229.19 | 0.705 | 4.15 | -- | -- | -1.58 | -- | -- | -0.581 | -- | -78.43 | 953 | 19 | -- |
| 340.21 | 0.861 | 4.15 | -- | -- | -- | -- | -- | -0.589 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 169.76 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 9 |
| 3 | 173.35 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 5 | 174.94 | temperature | 10 | 90 | > th | dose dependent | sin | 5 | NA |
| 8 | 175.63 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 26 | 177.89 | temperature | 30 | 90 | < th | dose dependent | sin | 5 | NA |
| 34 | 178.25 | temperature | 25 | 270 | > th | dose dependent | rect. | 22 | 11 |
| 45 | 178.86 | temperature | 25 | 270 | > th | dose dependent | rect. | 7 | 1 |
| 46 | 178.86 | temperature | 25 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 72 | 180.12 | temperature | 25 | 270 | > th | dose dependent | rect. | 3 | 5 |
| 75 | 180.21 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 8 |
| 87 | 180.83 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 8 |
| 102 | 181.64 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 153 | 183.36 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 173 | 184.50 | temperature | 20 | 90 | > th | dose dependent | rect. | 24 | 15 |
| 178 | 184.67 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 264 | 186.49 | temperature | 25 | 270 | > th | dose independent | rect. | 24 | 9 |
| 287 | 186.87 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 300 | 187.25 | temperature | 25 | 270 | < th | dose independent | sin | 7 | NA |
| 329 | 187.84 | temperature | 25 | 90 | < th | dose independent | sin | 5 | NA |
| 333 | 187.89 | temperature | 25 | 270 | > th | dose independent | sin | 7 | NA |
| 334 | 187.89 | temperature | 25 | 90 | > th | dose independent | sin | 5 | NA |
| 343 | 187.97 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 2 |
| 382 | 188.56 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 397 | 188.81 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 4 |
| 600 | 190.60 | temperature | 25 | 90 | > th | dose independent | rect. | 24 | 15 |
| 615 | 190.64 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 713 | 191.33 | temperature | 30 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 903 | 192.57 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 3 | 18 |
| 958 | 192.87 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 977 | 193.03 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 3 | 5 |