Os02g0834800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0834800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 175.23 | 0.622 | 5.93 | 2.21 | 0.515 | 1.61 | 0.00637 | 5.2 | -0.58 | 18.5 | 1.171 | 4338 | -- | -- |
| 222.44 | 0.695 | 5.98 | 1.77 | 0.175 | 1.27 | 0.272 | -- | -0.576 | 18.2 | 16.19 | 4910 | -- | -- |
| 175.22 | 0.617 | 5.93 | 2.21 | 0.515 | 1.62 | -- | 5.21 | -0.58 | 18.6 | 1.177 | 4341 | -- | -- |
| 206.7 | 0.67 | 6.04 | 1.03 | 0.169 | 1.5 | -- | -- | -0.915 | 20.5 | 10.02 | 4929 | -- | -- |
| 183.43 | 0.631 | 5.93 | 2.15 | -- | 1.8 | -- | 5.8 | -0.589 | -- | 1.171 | 8449 | -- | -- |
| 239.36 | 0.725 | 5.97 | 1.32 | 0.468 | -- | -0.136 | -- | -0.517 | 18.6 | -- | -- | -- | -- |
| 239.41 | 0.725 | 5.97 | 1.32 | 0.468 | -- | -- | -- | -0.518 | 18.5 | -- | -- | -- | -- |
| 207.57 | 0.671 | 6.04 | 1.04 | -- | 1.56 | -- | -- | -0.924 | -- | 10.14 | 4987 | -- | -- |
| 234.31 | 0.713 | 6.05 | -- | 0.152 | 1.82 | -- | -- | -1.09 | 21.6 | 10 | 4908 | -- | -- |
| 250.8 | 0.74 | 5.96 | 1.31 | -- | -- | -- | -- | -0.527 | -- | -- | -- | -- | -- |
| 285.31 | 0.79 | 6 | -- | 0.451 | -- | -- | -- | -0.665 | 18.7 | -- | -- | -- | -- |
| 234.78 | 0.714 | 6.06 | -- | -- | 1.83 | -- | -- | -1.11 | -- | 10.01 | 4973 | -- | -- |
| 295.95 | 0.803 | 5.99 | -- | -- | -- | -- | -- | -0.672 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.32 | temperature | 20 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 2 | 150.42 | temperature | 20 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 8 | 151.12 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 11 | 151.21 | temperature | 25 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 14 | 151.29 | temperature | 30 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 25 | 151.71 | temperature | 30 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 41 | 152.02 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 62 | 152.29 | temperature | 25 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 68 | 152.32 | temperature | 15 | 14400 | > th | dose dependent | rect. | 4 | 11 |
| 76 | 152.38 | temperature | 10 | 14400 | > th | dose dependent | rect. | 2 | 13 |
| 77 | 152.39 | temperature | 25 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 110 | 152.51 | temperature | 30 | 14400 | < th | dose dependent | rect. | 2 | 13 |
| 114 | 152.52 | temperature | 30 | 14400 | < th | dose dependent | rect. | 4 | 11 |
| 157 | 152.67 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 179 | 152.76 | temperature | 10 | 14400 | > th | dose dependent | sin | 4 | NA |
| 195 | 152.80 | temperature | 30 | 14400 | < th | dose dependent | sin | 4 | NA |
| 255 | 152.97 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 526 | 153.86 | temperature | 15 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 916 | 154.76 | temperature | 10 | 14400 | > th | dose dependent | rect. | 4 | 23 |
| 922 | 154.77 | temperature | 30 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 923 | 154.78 | temperature | 10 | 14400 | > th | dose dependent | no | NA | NA |
| 933 | 154.79 | temperature | 30 | 14400 | < th | dose dependent | no | NA | NA |
| 966 | 154.83 | temperature | 10 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 986 | 154.85 | temperature | 30 | 14400 | < th | dose dependent | rect. | 11 | 23 |