Os02g0834300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0834300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 253.47 | 0.748 | 5.91 | 1.04 | 0.116 | 3.32 | -2.4 | 4.78 | -0.729 | 19.5 | 19.19 | 6679 | -- | -- |
| 272.98 | 0.77 | 5.71 | 1.31 | 0.0169 | 1.93 | 2.74 | -- | -0.62 | 6.56 | 19.1 | 6542 | -- | -- |
| 262.46 | 0.755 | 5.97 | 1.15 | 0.319 | 3.86 | -- | 6 | -0.748 | 0.401 | 18.9 | 6829 | -- | -- |
| 285.99 | 0.788 | 5.76 | 1.5 | 0.258 | 1.92 | -- | -- | -0.735 | 22.1 | 19.3 | 6491 | -- | -- |
| 268.16 | 0.763 | 5.93 | 1.14 | -- | 3.7 | -- | 5.59 | -0.736 | -- | 18.9 | 6810 | -- | -- |
| 319.55 | 0.838 | 5.84 | 0.0237 | 0.0884 | -- | -2.48 | -- | -1.15 | 19.3 | -- | -- | -- | -- |
| 332.74 | 0.854 | 5.84 | 0.0685 | 0.245 | -- | -- | -- | -1.16 | 0.236 | -- | -- | -- | -- |
| 288.1 | 0.791 | 5.73 | 1.35 | -- | 1.86 | -- | -- | -0.669 | -- | 19.3 | 6815 | -- | -- |
| 291.89 | 0.796 | 5.76 | -- | 0.261 | 0.994 | -- | -- | -0.849 | 22.7 | 24.1 | 3353 | -- | -- |
| 336.53 | 0.857 | 5.84 | 0.0765 | -- | -- | -- | -- | -1.16 | -- | -- | -- | -- | -- |
| 332.86 | 0.853 | 5.85 | -- | 0.246 | -- | -- | -- | -1.17 | 0.251 | -- | -- | -- | -- |
| 284.78 | 0.786 | 5.76 | -- | -- | 1.11 | -- | -- | -0.82 | -- | 22.4 | 1917 | -- | -- |
| 336.68 | 0.856 | 5.84 | -- | -- | -- | -- | -- | -1.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 246.77 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 4 | 249.51 | temperature | 10.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 6 | 250.90 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 10 | 251.94 | temperature | 30.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 35 | 255.50 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 51 | 256.25 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 59 | 256.44 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 65 | 256.76 | temperature | 10.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 73 | 257.05 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 16 |
| 106 | 257.49 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 108 | 257.50 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 21 |
| 161 | 258.15 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 235 | 258.88 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 6 |
| 264 | 259.12 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 22 |
| 334 | 259.64 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 339 | 259.67 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 386 | 260.00 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 417 | 260.15 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 448 | 260.29 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 11 |
| 542 | 260.86 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 753 | 261.88 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 777 | 261.97 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 796 | 262.04 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |