Os02g0833400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0833400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.49 | 0.288 | 12.2 | 0.0385 | 0.755 | 0.534 | 0.355 | 3.32 | -0.289 | 19.9 | 40.86 | 268 | -- | -- |
| 45.86 | 0.315 | 12.2 | 0.0312 | 0.764 | 0.348 | 0.155 | -- | -0.28 | 19.9 | 40 | 324 | -- | -- |
| 37.83 | 0.286 | 12.2 | 0.029 | 0.755 | 0.545 | -- | 3.31 | -0.289 | 19.9 | 41.01 | 269 | -- | -- |
| 45.64 | 0.315 | 12.2 | -0.0404 | 0.708 | 0.357 | -- | -- | -0.303 | 20.1 | 30 | 414 | -- | -- |
| 59.11 | 0.358 | 12.2 | 0.0774 | -- | 0.676 | -- | 1.66 | -0.342 | -- | 31.99 | 817 | -- | -- |
| 46.94 | 0.321 | 12.2 | 0.00965 | 0.799 | -- | 0.362 | -- | -0.266 | 19.3 | -- | -- | -- | -- |
| 47.29 | 0.322 | 12.2 | 0.00106 | 0.798 | -- | -- | -- | -0.266 | 19.4 | -- | -- | -- | -- |
| 55.43 | 0.347 | 12.2 | -0.0541 | -- | 0.844 | -- | -- | -0.358 | -- | -2.963 | 807 | -- | -- |
| 45.59 | 0.314 | 12.2 | -- | 0.711 | 0.344 | -- | -- | -0.294 | 20 | 30 | 399 | -- | -- |
| 81.26 | 0.421 | 12.2 | -0.0117 | -- | -- | -- | -- | -0.279 | -- | -- | -- | -- | -- |
| 47.29 | 0.322 | 12.2 | -- | 0.798 | -- | -- | -- | -0.266 | 19.4 | -- | -- | -- | -- |
| 55.52 | 0.347 | 12.2 | -- | -- | 0.838 | -- | -- | -0.359 | -- | -8.729 | 808 | -- | -- |
| 81.27 | 0.421 | 12.2 | -- | -- | -- | -- | -- | -0.277 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.34 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 4 | 34.90 | temperature | 25 | 270 | > th | dose dependent | sin | 5 | NA |
| 8 | 35.10 | temperature | 25 | 90 | > th | dose dependent | sin | 2 | NA |
| 99 | 36.39 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 20 |
| 100 | 36.39 | radiation | 40 | 270 | > th | dose dependent | rect. | 14 | 21 |
| 105 | 36.46 | temperature | 25 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 106 | 36.47 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 9 |
| 152 | 36.72 | radiation | 40 | 270 | > th | dose dependent | sin | 8 | NA |
| 185 | 36.91 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 13 |
| 192 | 36.95 | temperature | 25 | 270 | > th | dose independent | sin | 2 | NA |
| 194 | 36.95 | temperature | 25 | 270 | > th | dose dependent | rect. | 9 | 2 |
| 202 | 36.99 | radiation | 40 | 270 | > th | dose dependent | rect. | 9 | 2 |
| 241 | 37.09 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 302 | 37.19 | radiation | 40 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 442 | 37.51 | radiation | 40 | 270 | > th | dose dependent | no | NA | NA |
| 600 | 37.53 | temperature | 25 | 270 | < th | dose independent | sin | 2 | NA |
| 604 | 37.54 | temperature | 25 | 270 | < th | dose independent | rect. | 8 | 6 |
| 607 | 37.55 | temperature | 30 | 270 | < th | dose dependent | sin | 1 | NA |
| 636 | 37.60 | temperature | 25 | 270 | < th | dose independent | rect. | 4 | 10 |
| 643 | 37.62 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 3 |
| 704 | 37.78 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 5 |
| 727 | 37.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 11 |
| 730 | 37.86 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 9 |
| 735 | 37.88 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 2 |
| 789 | 37.95 | radiation | 40 | 270 | < th | dose independent | sin | 6 | NA |
| 809 | 37.97 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 17 |