Os02g0832700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Metal tolerance protein C2 (AtMTPc2).
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Os02g0832700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Metal tolerance protein C2 (AtMTPc2).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.41 | 0.172 | 10.6 | 0.536 | 0.0905 | 0.218 | 0.108 | 1.14 | 0.362 | 22.4 | 0.04693 | 4903 | -- | -- |
| 14.29 | 0.176 | 10.6 | 0.533 | 0.0897 | 0.415 | 0.106 | -- | 0.368 | 22.1 | 0.4082 | 4684 | -- | -- |
| 13.45 | 0.171 | 10.6 | 0.531 | 0.0889 | 0.225 | -- | 1.15 | 0.362 | 22.5 | 0.02564 | 4844 | -- | -- |
| 13.87 | 0.173 | 10.6 | 0.501 | 0.0967 | 0.514 | -- | -- | 0.367 | 22.3 | 0.3953 | 2817 | -- | -- |
| 13.94 | 0.174 | 10.6 | 0.536 | -- | 0.218 | -- | 1.17 | 0.363 | -- | 0.06843 | 4839 | -- | -- |
| 18.04 | 0.199 | 10.6 | 0.671 | 0.0987 | -- | 0.151 | -- | 0.33 | 22.9 | -- | -- | -- | -- |
| 18.13 | 0.199 | 10.6 | 0.664 | 0.0981 | -- | -- | -- | 0.33 | 22.8 | -- | -- | -- | -- |
| 14.42 | 0.177 | 10.6 | 0.519 | -- | 0.499 | -- | -- | 0.363 | -- | 0.422 | 2813 | -- | -- |
| 15.99 | 0.186 | 10.6 | -- | 0.0717 | 0.591 | -- | -- | 0.345 | 23.2 | 0.546 | 32727 | -- | -- |
| 18.73 | 0.202 | 10.6 | 0.666 | -- | -- | -- | -- | 0.33 | -- | -- | -- | -- | -- |
| 29.77 | 0.255 | 10.6 | -- | 0.104 | -- | -- | -- | 0.256 | 23.2 | -- | -- | -- | -- |
| 16.02 | 0.186 | 10.6 | -- | -- | 0.538 | -- | -- | 0.377 | -- | 1 | 37865 | -- | -- |
| 30.44 | 0.258 | 10.6 | -- | -- | -- | -- | -- | 0.256 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.31 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 2 | 13.48 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 15 |
| 9 | 13.49 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 22 |
| 36 | 13.54 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 15 | NA |
| 43 | 13.54 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 22 |
| 61 | 13.56 | precipitation | 0.1 | 4320 | > th | dose dependent | no | NA | NA |
| 62 | 13.56 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 11 |
| 68 | 13.56 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 69 | 13.56 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 23 |
| 140 | 13.69 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 19 | NA |
| 141 | 13.69 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 19 | NA |
| 142 | 13.69 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 19 | NA |
| 155 | 13.70 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 8 |
| 158 | 13.70 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 8 |
| 167 | 13.71 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 8 |
| 230 | 13.76 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 0 | NA |
| 273 | 13.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 274 | 13.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 283 | 13.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 299 | 13.81 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 15 |
| 300 | 13.81 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 15 |
| 303 | 13.81 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 19 |
| 304 | 13.81 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 20 |
| 311 | 13.81 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 15 |
| 314 | 13.81 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 19 |
| 403 | 13.83 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 23 |
| 404 | 13.83 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 23 |
| 423 | 13.83 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 23 |
| 517 | 13.86 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 20 |
| 550 | 13.87 | wind | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 568 | 13.87 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 20 |
| 612 | 13.87 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 20 |
| 755 | 13.90 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 22 |
| 757 | 13.90 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 22 |
| 785 | 13.90 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 22 |
| 793 | 13.91 | precipitation | 0.1 | 4320 | > th | dose independent | no | NA | NA |
| 795 | 13.91 | precipitation | 0.1 | 4320 | < th | dose independent | no | NA | NA |
| 824 | 13.91 | precipitation | 0.1 | 4320 | < th | dose dependent | no | NA | NA |
| 883 | 13.93 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 14 |
| 884 | 13.93 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 14 |
| 909 | 13.93 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 14 |
| 923 | 13.94 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 966 | 13.95 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 12 |
| 967 | 13.95 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 12 |
| 986 | 13.95 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 991 | 13.95 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 12 |