Os02g0832500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Callose synthase 1 catalytic subunit.
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Os02g0832500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Callose synthase 1 catalytic subunit.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.46 | 0.259 | 10.8 | 1.09 | 0.61 | -0.857 | 0.235 | 2.66 | 0.453 | 1.02 | 18.9 | 1640 | -- | -- |
| 35.25 | 0.277 | 10.8 | 0.659 | 0.612 | -1.09 | 0.214 | -- | 0.438 | 1.12 | 12.87 | 8958 | -- | -- |
| 30.69 | 0.258 | 10.8 | 1.09 | 0.609 | -0.858 | -- | 2.68 | 0.453 | 0.984 | 18.9 | 1643 | -- | -- |
| 35.25 | 0.277 | 10.8 | 0.62 | 0.631 | -1.03 | -- | -- | 0.389 | 1.15 | 10.72 | 8987 | -- | -- |
| 38.54 | 0.291 | 10.8 | 0.594 | -- | -1.32 | -- | 1.56 | 0.363 | -- | 18.66 | 1676 | -- | -- |
| 51.99 | 0.338 | 10.9 | 0.0679 | 0.606 | -- | 0.225 | -- | 0.0782 | 1.18 | -- | -- | -- | -- |
| 52.2 | 0.338 | 10.9 | 0.06 | 0.606 | -- | -- | -- | 0.077 | 1.16 | -- | -- | -- | -- |
| 40.4 | 0.297 | 10.8 | 0.365 | -- | -1.55 | -- | -- | 0.295 | -- | 10.34 | 6045 | -- | -- |
| 38.76 | 0.292 | 10.9 | -- | 0.317 | -1.08 | -- | -- | 0.204 | 0.017 | 15.35 | 1767 | -- | -- |
| 74.94 | 0.405 | 10.9 | 0.0832 | -- | -- | -- | -- | 0.0892 | -- | -- | -- | -- | -- |
| 52.3 | 0.338 | 10.9 | -- | 0.607 | -- | -- | -- | 0.0703 | 1.16 | -- | -- | -- | -- |
| 43.68 | 0.309 | 10.9 | -- | -- | -1.37 | -- | -- | 0.242 | -- | 15.35 | 1767 | -- | -- |
| 75.12 | 0.405 | 10.9 | -- | -- | -- | -- | -- | 0.0799 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.86 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 2 | 25.98 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 15 | 26.52 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 16 | 26.53 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 21 | 26.55 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 56 | 27.62 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 12 |
| 58 | 27.64 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 88 | 27.88 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 107 | 28.09 | radiation | 1 | 14400 | < th | dose dependent | sin | 12 | NA |
| 123 | 28.16 | radiation | 1 | 14400 | < th | dose independent | sin | 12 | NA |
| 152 | 28.30 | radiation | 1 | 14400 | > th | dose independent | sin | 12 | NA |
| 217 | 28.54 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 5 |
| 281 | 28.76 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 23 |
| 302 | 28.83 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 17 |
| 310 | 28.84 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 15 |
| 341 | 28.85 | radiation | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 372 | 28.89 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 13 |
| 376 | 28.89 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 16 |
| 399 | 28.92 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 404 | 28.92 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 11 |
| 408 | 28.92 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 411 | 28.93 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 414 | 28.93 | humidity | 90 | 14400 | > th | dose dependent | sin | 12 | NA |
| 420 | 28.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 476 | 29.05 | radiation | 1 | 14400 | < th | dose independent | rect. | 10 | 22 |
| 532 | 29.14 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 555 | 29.16 | radiation | 1 | 14400 | < th | dose dependent | rect. | 10 | 9 |
| 598 | 29.19 | radiation | 1 | 14400 | > th | dose independent | rect. | 10 | 22 |
| 606 | 29.20 | radiation | 1 | 14400 | < th | dose independent | no | NA | NA |
| 609 | 29.20 | radiation | 1 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 621 | 29.20 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 21 |
| 633 | 29.20 | radiation | 1 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 725 | 29.27 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 14 |
| 746 | 29.28 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 811 | 29.34 | radiation | 1 | 14400 | > th | dose independent | no | NA | NA |