Os02g0832400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Callose synthase 1 catalytic subunit.
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Os02g0832400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Callose synthase 1 catalytic subunit.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.48 | 0.405 | 7.58 | 0.961 | 0.125 | -1.71 | 0.719 | 2.87 | -0.0907 | 1.12 | 16.38 | 94 | -- | -- |
| 79.72 | 0.416 | 7.63 | 0.491 | 0.103 | -1.84 | 0.016 | -- | -0.202 | 2.6 | -0.8906 | 66 | -- | -- |
| 75.97 | 0.406 | 7.59 | 0.866 | 0.147 | -1.83 | -- | 2.36 | -0.085 | 23 | 15.39 | 119 | -- | -- |
| 79.31 | 0.415 | 7.64 | 0.51 | 0.132 | -1.86 | -- | -- | -0.212 | 23.5 | -63.8 | 106 | -- | -- |
| 76.61 | 0.408 | 7.59 | 0.834 | -- | -1.88 | -- | 2.08 | -0.113 | -- | 15.66 | 84 | -- | -- |
| 112.83 | 0.498 | 7.69 | 0.134 | 0.609 | -- | 0.257 | -- | -0.47 | 2.57 | -- | -- | -- | -- |
| 113.07 | 0.498 | 7.7 | 0.128 | 0.61 | -- | -- | -- | -0.471 | 2.58 | -- | -- | -- | -- |
| 80.03 | 0.417 | 7.63 | 0.529 | -- | -1.95 | -- | -- | -0.196 | -- | -53.8 | 78 | -- | -- |
| 85.45 | 0.431 | 7.66 | -- | 0.191 | -1.6 | -- | -- | -0.3 | 0.846 | -76.78 | 109 | -- | -- |
| 134.86 | 0.543 | 7.69 | 0.154 | -- | -- | -- | -- | -0.456 | -- | -- | -- | -- | -- |
| 113.5 | 0.498 | 7.7 | -- | 0.612 | -- | -- | -- | -0.486 | 2.59 | -- | -- | -- | -- |
| 86.87 | 0.434 | 7.65 | -- | -- | -1.78 | -- | -- | -0.274 | -- | -49.94 | 65 | -- | -- |
| 135.48 | 0.543 | 7.7 | -- | -- | -- | -- | -- | -0.473 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.01 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 2 | 72.39 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 5 | 72.49 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 10 | 72.64 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 19 | 72.68 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 13 |
| 24 | 72.81 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 25 | 72.83 | radiation | 1 | 14400 | < th | dose dependent | sin | 10 | NA |
| 40 | 72.94 | radiation | 1 | 14400 | < th | dose independent | sin | 11 | NA |
| 42 | 72.95 | radiation | 1 | 14400 | < th | dose dependent | rect. | 16 | 19 |
| 44 | 72.97 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 94 | 73.09 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 164 | 73.42 | radiation | 1 | 14400 | > th | dose independent | sin | 11 | NA |
| 175 | 73.47 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 200 | 73.56 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 16 |
| 246 | 73.59 | radiation | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 261 | 73.62 | radiation | 1 | 14400 | < th | dose dependent | rect. | 10 | 23 |
| 263 | 73.64 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 274 | 73.66 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 276 | 73.66 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 298 | 73.70 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 300 | 73.70 | humidity | 90 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 312 | 73.71 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 318 | 73.72 | temperature | 15 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 326 | 73.75 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 7 |
| 329 | 73.75 | radiation | 1 | 14400 | < th | dose dependent | rect. | 7 | 23 |
| 343 | 73.81 | humidity | 90 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 359 | 73.87 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 378 | 73.91 | radiation | 1 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 380 | 73.92 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 6 |
| 392 | 73.93 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 20 |
| 399 | 73.94 | radiation | 1 | 14400 | < th | dose independent | no | NA | NA |
| 402 | 73.94 | radiation | 1 | 14400 | < th | dose independent | rect. | 1 | 18 |
| 451 | 73.96 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 455 | 73.98 | radiation | 1 | 14400 | < th | dose dependent | rect. | 16 | 4 |
| 492 | 74.03 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 511 | 74.07 | radiation | 1 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 524 | 74.15 | temperature | 15 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 526 | 74.15 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 543 | 74.19 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 14 |
| 578 | 74.24 | radiation | 1 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 585 | 74.25 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 607 | 74.27 | radiation | 1 | 14400 | > th | dose independent | no | NA | NA |
| 610 | 74.27 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 661 | 74.28 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 669 | 74.31 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 707 | 74.38 | radiation | 1 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 712 | 74.40 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 724 | 74.41 | humidity | 80 | 43200 | > th | dose dependent | rect. | 8 | 3 |
| 728 | 74.42 | humidity | 90 | 43200 | > th | dose independent | rect. | 6 | 6 |
| 741 | 74.45 | radiation | 1 | 14400 | < th | dose independent | sin | 3 | NA |
| 756 | 74.47 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 815 | 74.54 | humidity | 90 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 830 | 74.55 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 11 |
| 857 | 74.56 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 889 | 74.58 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 977 | 74.65 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 980 | 74.66 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 984 | 74.67 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 4 |