Os02g0831100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0831100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.78 | 0.318 | 11.7 | 0.0854 | 1.28 | -0.164 | 0.0874 | -2.11 | -0.191 | 6.7 | 1005 | 8258 | -- | -- |
| 50.22 | 0.33 | 11.7 | -0.169 | 1.26 | -0.386 | -0.145 | -- | -0.24 | 6.46 | 999.4 | 4910 | -- | -- |
| 45.8 | 0.315 | 11.7 | 0.0871 | 1.28 | -0.164 | -- | -2.12 | -0.192 | 6.7 | 1005 | 8235 | -- | -- |
| 49.47 | 0.328 | 11.7 | -0.232 | 1.3 | -0.44 | -- | -- | -0.223 | 6.57 | 999.2 | 4835 | -- | -- |
| 130.95 | 0.533 | 11.7 | 0.135 | -- | -0.21 | -- | -1.97 | -0.152 | -- | 1005 | 8321 | -- | -- |
| 54.22 | 0.345 | 11.7 | -0.169 | 1.28 | -- | 0.139 | -- | -0.247 | 6.66 | -- | -- | -- | -- |
| 54.27 | 0.345 | 11.7 | -0.167 | 1.28 | -- | -- | -- | -0.247 | 6.66 | -- | -- | -- | -- |
| 134.69 | 0.541 | 11.7 | -0.215 | -- | -0.434 | -- | -- | -0.184 | -- | 999.1 | 5206 | -- | -- |
| 50.83 | 0.332 | 11.7 | -- | 1.28 | -0.401 | -- | -- | -0.183 | 6.66 | 999.1 | 4757 | -- | -- |
| 139.67 | 0.552 | 11.7 | -0.137 | -- | -- | -- | -- | -0.222 | -- | -- | -- | -- | -- |
| 55 | 0.347 | 11.7 | -- | 1.28 | -- | -- | -- | -0.229 | 6.66 | -- | -- | -- | -- |
| 135.84 | 0.543 | 11.7 | -- | -- | -0.394 | -- | -- | -0.163 | -- | 998.9 | 5210 | -- | -- |
| 140.16 | 0.553 | 11.7 | -- | -- | -- | -- | -- | -0.206 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.66 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 42.22 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 3 | 42.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 4 | 42.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 5 | 43.51 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 6 | 44.19 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 13 |
| 7 | 44.24 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 13 |
| 8 | 44.24 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 13 |
| 9 | 44.26 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 13 |
| 10 | 44.32 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 16 | 44.41 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 10 |
| 17 | 44.41 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 10 |
| 20 | 44.44 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 28 | 44.47 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 29 | 44.47 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 32 | 44.48 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 10 |
| 35 | 44.51 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 36 | 44.51 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 37 | 44.51 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 46 | 44.63 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 47 | 44.64 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 55 | 44.67 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 58 | 44.68 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 60 | 44.68 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 71 | 44.85 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 109 | 45.15 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 120 | 45.21 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 2 |
| 128 | 45.25 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 130 | 45.26 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 135 | 45.27 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 7 |
| 142 | 45.29 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 152 | 45.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 158 | 45.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 160 | 45.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 4 |
| 162 | 45.34 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 163 | 45.34 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 173 | 45.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 226 | 45.53 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 6 |
| 250 | 45.60 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 4 |
| 272 | 45.66 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 273 | 45.66 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 5 |
| 293 | 45.72 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 327 | 45.81 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 343 | 45.84 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 365 | 45.87 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 4 | NA |
| 367 | 45.87 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 4 | NA |
| 371 | 45.87 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 372 | 45.88 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 4 | NA |
| 380 | 45.90 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 394 | 45.92 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 404 | 45.95 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 5 | NA |
| 409 | 45.96 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 442 | 46.01 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 3 |
| 448 | 46.02 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 451 | 46.02 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 12 |
| 455 | 46.02 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 461 | 46.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 462 | 46.03 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 10 |
| 475 | 46.06 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 23 | 10 |
| 480 | 46.06 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 23 | 10 |
| 496 | 46.11 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 529 | 46.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 537 | 46.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 570 | 46.20 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 577 | 46.21 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 583 | 46.22 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 7 |
| 590 | 46.23 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 602 | 46.24 | wind | 1.0 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 618 | 46.26 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 628 | 46.27 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 7 |
| 665 | 46.33 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 666 | 46.33 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 669 | 46.34 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 696 | 46.38 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 701 | 46.38 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 17 |
| 723 | 46.40 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 725 | 46.41 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 726 | 46.41 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 750 | 46.43 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 14 |
| 752 | 46.44 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 798 | 46.47 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 799 | 46.48 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 803 | 46.48 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 811 | 46.49 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 814 | 46.49 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 2 |
| 843 | 46.51 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 23 | 12 |
| 854 | 46.52 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 23 | 10 |
| 877 | 46.55 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 882 | 46.55 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 7 |
| 940 | 46.61 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 990 | 46.64 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |