Os02g0829200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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Os02g0829200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.85 | 0.308 | 11.9 | -0.34 | 1.51 | -0.773 | 0.373 | 0.754 | -0.318 | 8.9 | 19.7 | 1660 | -- | -- |
| 43.7 | 0.308 | 11.9 | -0.442 | 1.51 | -0.907 | 0.375 | -- | -0.339 | 8.9 | 19.64 | 1633 | -- | -- |
| 43.32 | 0.307 | 11.9 | -0.326 | 1.51 | -0.778 | -- | 0.769 | -0.316 | 8.9 | 19.66 | 1653 | -- | -- |
| 44.12 | 0.309 | 11.9 | -0.438 | 1.51 | -0.937 | -- | -- | -0.34 | 8.88 | 19.5 | 1641 | -- | -- |
| 155.92 | 0.582 | 12 | -0.379 | -- | -0.859 | -- | 0.403 | -0.216 | -- | 21.89 | 699 | -- | -- |
| 57.22 | 0.355 | 12 | -0.803 | 1.5 | -- | 0.488 | -- | -0.508 | 8.9 | -- | -- | -- | -- |
| 58.03 | 0.357 | 12 | -0.786 | 1.5 | -- | -- | -- | -0.508 | 8.9 | -- | -- | -- | -- |
| 129.52 | 0.53 | 11.9 | -0.462 | -- | -1.08 | -- | -- | -0.107 | -- | 25.3 | 669 | -- | -- |
| 45.74 | 0.315 | 11.9 | -- | 1.49 | -1.15 | -- | -- | -0.251 | 8.87 | 18.98 | 3218 | -- | -- |
| 186.97 | 0.639 | 12 | -0.786 | -- | -- | -- | -- | -0.497 | -- | -- | -- | -- | -- |
| 74.32 | 0.403 | 12 | -- | 1.5 | -- | -- | -- | -0.42 | 8.94 | -- | -- | -- | -- |
| 134.82 | 0.541 | 11.9 | -- | -- | -1.13 | -- | -- | -0.0409 | -- | 25.3 | 679 | -- | -- |
| 203.28 | 0.665 | 12 | -- | -- | -- | -- | -- | -0.41 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.81 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 2 | 39.82 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 6 | 40.43 | humidity | 80 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 7 | 40.61 | humidity | 80 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 8 | 40.64 | humidity | 80 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 12 | 40.96 | wind | 9 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 17 | 41.04 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 18 |
| 18 | 41.09 | wind | 9 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 22 | 41.11 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 43 | 41.27 | wind | 9 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 49 | 41.33 | wind | 1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 51 | 41.33 | wind | 1 | 43200 | > th | dose dependent | rect. | 22 | 10 |
| 55 | 41.37 | temperature | 20 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 73 | 41.48 | humidity | 90 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 84 | 41.52 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 86 | 41.53 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 89 | 41.55 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 95 | 41.57 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 101 | 41.58 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 115 | 41.67 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 125 | 41.73 | wind | 3 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 137 | 41.76 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 138 | 41.77 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 143 | 41.78 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 170 | 41.85 | wind | 3 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 236 | 42.04 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 278 | 42.11 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 285 | 42.13 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 288 | 42.14 | temperature | 30 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 316 | 42.18 | wind | 9 | 43200 | < th | dose dependent | sin | 8 | NA |
| 317 | 42.18 | temperature | 10 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 356 | 42.23 | temperature | 20 | 14400 | < th | dose independent | sin | 14 | NA |
| 365 | 42.23 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 12 |
| 408 | 42.28 | wind | 3 | 43200 | > th | dose independent | rect. | 4 | 8 |
| 412 | 42.28 | wind | 1 | 43200 | > th | dose dependent | sin | 8 | NA |
| 440 | 42.32 | humidity | 90 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 451 | 42.33 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 474 | 42.36 | temperature | 20 | 14400 | > th | dose independent | sin | 14 | NA |
| 477 | 42.36 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 10 |
| 509 | 42.39 | temperature | 30 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 514 | 42.40 | temperature | 10 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 539 | 42.43 | temperature | 30 | 14400 | < th | dose dependent | rect. | 7 | 8 |
| 554 | 42.46 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 560 | 42.46 | temperature | 10 | 14400 | > th | dose dependent | rect. | 7 | 8 |
| 599 | 42.50 | temperature | 20 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 622 | 42.52 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 673 | 42.56 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 725 | 42.60 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 793 | 42.63 | temperature | 30 | 14400 | < th | dose dependent | sin | 0 | NA |
| 807 | 42.64 | wind | 1 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 903 | 42.70 | temperature | 20 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 909 | 42.70 | temperature | 10 | 14400 | > th | dose dependent | sin | 0 | NA |