Os02g0828800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0828800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.76 | 0.293 | 9.26 | 1.27 | 0.0942 | -1.55 | -0.0794 | 2.35 | 0.437 | 10.9 | 17.54 | 230 | -- | -- |
| 42.64 | 0.304 | 9.32 | 0.867 | 0.0518 | -1.67 | 0.561 | -- | 0.317 | 15.7 | 15.09 | 231 | -- | -- |
| 38.78 | 0.29 | 9.26 | 1.26 | 0.092 | -1.54 | -- | 2.32 | 0.435 | 10.7 | 17.52 | 231 | -- | -- |
| 43.03 | 0.306 | 9.31 | 0.865 | 0.123 | -1.64 | -- | -- | 0.32 | 9.92 | 14.9 | 207 | -- | -- |
| 39.02 | 0.291 | 9.26 | 1.27 | -- | -1.53 | -- | 2.34 | 0.434 | -- | 17.42 | 275 | -- | -- |
| 72 | 0.398 | 9.36 | 0.513 | 0.495 | -- | -0.237 | -- | 0.0846 | 5.02 | -- | -- | -- | -- |
| 72.14 | 0.398 | 9.36 | 0.513 | 0.494 | -- | -- | -- | 0.0858 | 5.05 | -- | -- | -- | -- |
| 43.29 | 0.306 | 9.31 | 0.87 | -- | -1.64 | -- | -- | 0.323 | -- | 14.9 | 263 | -- | -- |
| 60.76 | 0.363 | 9.34 | -- | 0.193 | -1.18 | -- | -- | 0.172 | 7.58 | 16.8 | 162 | -- | -- |
| 84.92 | 0.431 | 9.36 | 0.531 | -- | -- | -- | -- | 0.0984 | -- | -- | -- | -- | -- |
| 79.08 | 0.416 | 9.37 | -- | 0.503 | -- | -- | -- | 0.0287 | 5.02 | -- | -- | -- | -- |
| 61.58 | 0.365 | 9.34 | -- | -- | -1.14 | -- | -- | 0.194 | -- | 18.6 | 265 | -- | -- |
| 92.36 | 0.449 | 9.38 | -- | -- | -- | -- | -- | 0.0395 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.84 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 3 | 38.09 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 5 |
| 6 | 38.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 12 | 38.69 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 14 | 38.73 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 20 | 38.91 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 21 | 38.91 | humidity | 90 | 14400 | > th | dose dependent | sin | 13 | NA |
| 22 | 38.93 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 37 | 39.03 | humidity | 90 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 77 | 39.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 119 | 39.45 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 9 |
| 127 | 39.47 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 132 | 39.48 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 142 | 39.50 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 156 | 39.57 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 189 | 39.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 19 |
| 190 | 39.66 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 213 | 39.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 284 | 39.95 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 298 | 39.99 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 301 | 40.00 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 306 | 40.01 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 328 | 40.06 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 343 | 40.10 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 345 | 40.10 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 351 | 40.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 353 | 40.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 356 | 40.12 | humidity | 90 | 14400 | < th | dose independent | sin | 14 | NA |
| 370 | 40.15 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 441 | 40.35 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 23 |
| 445 | 40.37 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 450 | 40.39 | humidity | 90 | 14400 | > th | dose independent | sin | 13 | NA |
| 461 | 40.42 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 477 | 40.44 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 552 | 40.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 595 | 40.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 597 | 40.68 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 610 | 40.70 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 617 | 40.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 632 | 40.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 757 | 40.91 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 840 | 41.03 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 875 | 41.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 879 | 41.10 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 900 | 41.14 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 917 | 41.17 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 937 | 41.20 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 17 |
| 964 | 41.24 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 11 |
| 976 | 41.25 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 987 | 41.26 | humidity | 80 | 43200 | > th | dose independent | rect. | 23 | 5 |