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Os02g0828300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0233) R2 : 0.744
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.15 (0.0591) R2dC : 0.748 R2C : 0.742
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0842 (0.0491) R2dN8 : 0.00213 R2N8 : -0.00421
σ : 0.44
deviance : 88.36
__
_____
C
peak time of C : 8.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
70.49 0.394 10.1 0.624 2.48 0.719 -0.525 -0.446 0.0298 9.22 27.63 83 -- --
70.89 0.392 10.1 0.623 2.48 0.705 -0.188 -- 0.0261 9.21 27.08 80 -- --
70.98 0.392 10.1 0.62 2.48 0.719 -- -0.121 0.0302 9.22 27.63 80 -- --
71.02 0.393 10.1 0.616 2.49 0.708 -- -- 0.0267 9.22 26.53 79 -- --
112.72 0.494 10.1 0.896 -- 2.82 -- -2 0.165 -- 3.475 983 -- --
79.32 0.418 10.1 0.587 2.15 -- -0.219 -- -0.0196 8.32 -- -- -- --
79.47 0.417 10.1 0.581 2.15 -- -- -- -0.0195 8.32 -- -- -- --
109.43 0.487 10.1 0.838 -- 2.92 -- -- 0.173 -- 2.816 994 -- --
80.82 0.419 10.1 -- 2.37 0.708 -- -- -0.0558 8.97 50 76 -- --
335.8 0.856 10.1 0.594 -- -- -- -- 0.0036 -- -- -- -- --
88.36 0.44 10.1 -- 2.15 -- -- -- -0.0842 8.3 -- -- -- --
127.45 0.526 10.1 -- -- 2.87 -- -- 0.083 -- 3.475 984 -- --
345.12 0.867 10.1 -- -- -- -- -- -0.0623 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 59.07 temperature 20.0 270 > th dose independent rect. 20 6
2 59.48 temperature 20.0 270 > th dose independent rect. 21 4
4 59.66 temperature 20.0 30 > th dose independent rect. 23 5
8 60.06 temperature 10.0 90 > th dose dependent rect. 20 8
11 60.18 temperature 10.0 270 > th dose dependent rect. 20 6
18 60.77 temperature 15.0 30 > th dose dependent rect. 23 5
24 61.10 temperature 20.0 270 > th dose independent rect. 23 1
28 61.17 temperature 15.0 270 > th dose dependent rect. 21 4
29 61.19 radiation 20.0 90 < th dose dependent rect. 4 16
39 61.69 radiation 10.0 90 < th dose independent rect. 4 16
48 61.97 temperature 15.0 270 > th dose dependent rect. 23 1
66 62.46 atmosphere 1010.0 90 < th dose independent rect. 20 8
73 62.65 radiation 30.0 90 < th dose dependent rect. 4 19
75 62.67 wind 9.0 90 < th dose dependent rect. 4 16
84 62.93 radiation 10.0 90 < th dose independent rect. 4 19
96 63.30 wind 5.0 90 < th dose independent rect. 4 16
105 63.40 atmosphere 1015.0 90 < th dose dependent rect. 21 7
109 63.48 precipitation 0.1 90 < th dose independent rect. 4 16
110 63.48 precipitation 0.1 90 < th dose dependent rect. 4 16
114 63.52 radiation 40.0 270 < th dose independent rect. 2 17
117 63.53 atmosphere 1010.0 270 < th dose independent rect. 21 4
119 63.59 temperature 20.0 90 > th dose independent rect. 20 21
121 63.64 temperature 15.0 270 > th dose independent rect. 21 17
125 63.69 wind 9.0 90 < th dose independent rect. 4 16
136 63.81 precipitation 0.1 90 < th dose independent rect. 20 8
137 63.81 wind 7.0 270 < th dose independent rect. 15 15
138 63.81 precipitation 0.1 90 < th dose dependent rect. 20 8
141 63.84 radiation 40.0 90 < th dose independent rect. 4 16
145 63.91 temperature 10.0 1440 > th dose independent rect. 22 7
148 63.91 temperature 30.0 1440 < th dose independent rect. 22 7
152 63.91 humidity 50.0 1440 > th dose independent rect. 22 7
159 63.91 atmosphere 995.0 1440 > th dose independent rect. 22 7
160 63.91 radiation 20.0 1440 < th dose independent rect. 22 7
172 63.91 temperature 10.0 1440 > th dose independent rect. 5 17
183 63.99 radiation 40.0 270 < th dose independent rect. 1 20
189 64.05 temperature 30.0 90 < th dose independent rect. 20 8
190 64.05 humidity 50.0 90 > th dose independent rect. 20 8
193 64.05 atmosphere 995.0 90 > th dose independent rect. 20 8
194 64.05 radiation 1.0 90 < th dose independent rect. 20 8
199 64.05 temperature 10.0 90 > th dose independent rect. 4 16
200 64.05 atmosphere 1015.0 90 < th dose independent rect. 4 16
202 64.05 radiation 1.0 90 < th dose dependent rect. 20 8
209 64.08 wind 9.0 90 < th dose independent rect. 20 8
210 64.09 radiation 40.0 90 < th dose dependent rect. 4 8
278 64.46 wind 7.0 270 < th dose independent rect. 14 7
290 64.52 atmosphere 1015.0 270 < th dose dependent rect. 21 4
327 64.75 temperature 15.0 270 > th dose independent rect. 6 9
346 64.87 wind 7.0 270 < th dose independent rect. 15 4
348 64.88 humidity 60.0 270 > th dose independent rect. 1 10
356 64.93 radiation 40.0 270 < th dose independent rect. 15 15
378 65.06 precipitation 0.1 270 < th dose independent rect. 6 9
380 65.06 precipitation 0.1 270 < th dose dependent rect. 6 9
382 65.07 atmosphere 1015.0 270 < th dose independent rect. 6 9
383 65.07 temperature 10.0 270 > th dose independent rect. 15 15
384 65.07 atmosphere 995.0 90 > th dose independent rect. 4 16
399 65.15 atmosphere 995.0 270 > th dose independent rect. 6 9
402 65.16 radiation 40.0 270 < th dose independent rect. 14 7
411 65.22 precipitation 0.1 270 < th dose independent rect. 15 15
414 65.22 temperature 30.0 270 < th dose independent rect. 20 19
416 65.22 precipitation 0.1 270 < th dose dependent rect. 15 15
433 65.31 atmosphere 1010.0 270 < th dose independent rect. 23 1
436 65.31 wind 9.0 270 < th dose dependent rect. 15 4
461 65.35 temperature 15.0 270 > th dose independent rect. 9 16
464 65.36 wind 9.0 270 < th dose independent rect. 2 18
467 65.37 wind 9.0 270 < th dose independent rect. 6 9
488 65.45 radiation 40.0 270 < th dose dependent rect. 2 9
489 65.45 temperature 10.0 90 > th dose dependent rect. 4 16
539 65.59 precipitation 0.1 270 < th dose independent rect. 2 18
540 65.59 humidity 50.0 90 > th dose dependent rect. 4 16
541 65.59 precipitation 0.1 270 < th dose dependent rect. 2 18
542 65.60 wind 9.0 90 < th dose dependent rect. 17 2
545 65.62 precipitation 0.1 270 < th dose independent rect. 14 7
547 65.62 precipitation 0.1 270 < th dose dependent rect. 14 7
556 65.64 precipitation 0.1 270 < th dose independent rect. 21 17
557 65.64 precipitation 0.1 270 < th dose dependent rect. 21 17
562 65.66 wind 9.0 270 < th dose dependent rect. 14 6
572 65.69 temperature 10.0 270 > th dose independent rect. 14 7
574 65.69 atmosphere 995.0 270 > th dose independent rect. 21 17
584 65.71 temperature 30.0 90 < th dose independent rect. 20 21
603 65.76 wind 1.0 270 > th dose independent rect. 14 7
615 65.78 radiation 30.0 90 < th dose dependent rect. 17 16
636 65.81 temperature 10.0 270 > th dose independent rect. 2 18
637 65.81 atmosphere 1015.0 270 < th dose independent rect. 2 18
646 65.82 wind 9.0 270 < th dose independent rect. 1 10
647 65.82 temperature 10.0 270 > th dose independent rect. 1 10
648 65.82 atmosphere 995.0 270 > th dose independent rect. 1 10
649 65.82 atmosphere 1015.0 270 < th dose independent rect. 1 10
655 65.83 humidity 50.0 30 > th dose dependent rect. 4 8
656 65.83 humidity 50.0 90 > th dose dependent rect. 20 8
683 65.92 wind 9.0 270 < th dose independent rect. 21 17
739 65.96 humidity 50.0 270 > th dose independent rect. 21 17
743 65.98 radiation 40.0 10 < th dose independent rect. 4 8
746 65.99 humidity 50.0 270 > th dose independent rect. 11 14
752 66.00 precipitation 0.1 270 < th dose independent rect. 1 10
755 66.00 precipitation 0.1 270 < th dose dependent rect. 1 10
767 66.05 atmosphere 1015.0 270 < th dose independent rect. 21 17
791 66.10 radiation 40.0 270 < th dose independent rect. 15 4
792 66.10 wind 9.0 270 < th dose independent rect. 1 20
796 66.11 radiation 20.0 90 < th dose independent rect. 4 8
801 66.13 atmosphere 995.0 270 > th dose dependent rect. 14 7
806 66.15 precipitation 0.1 270 < th dose independent rect. 11 14
809 66.15 precipitation 0.1 270 < th dose dependent rect. 11 14
813 66.16 atmosphere 995.0 270 > th dose dependent rect. 15 5
815 66.17 radiation 20.0 270 < th dose independent rect. 2 9
820 66.18 atmosphere 1015.0 30 < th dose dependent rect. 23 5
825 66.19 precipitation 0.1 270 < th dose independent rect. 15 4
829 66.19 precipitation 0.1 270 < th dose dependent rect. 15 4
833 66.20 humidity 50.0 30 > th dose independent rect. 4 17
866 66.23 atmosphere 995.0 270 > th dose independent rect. 15 15
871 66.25 precipitation 0.1 270 < th dose independent rect. 19 20
873 66.25 precipitation 0.1 270 < th dose dependent rect. 19 20
875 66.26 wind 1.0 270 > th dose independent rect. 6 9
879 66.27 humidity 50.0 270 > th dose dependent rect. 1 10
886 66.29 atmosphere 995.0 270 > th dose independent rect. 19 20
888 66.30 wind 1.0 270 > th dose independent rect. 15 4
898 66.31 radiation 30.0 90 < th dose dependent rect. 17 18
901 66.33 temperature 10.0 270 > th dose independent rect. 15 4
903 66.33 atmosphere 1010.0 270 < th dose independent rect. 15 4
910 66.34 atmosphere 1015.0 270 < th dose independent rect. 14 7
936 66.39 temperature 30.0 30 < th dose independent rect. 12 16
941 66.40 atmosphere 995.0 270 > th dose independent rect. 14 7
947 66.41 radiation 40.0 270 < th dose independent rect. 1 10
968 66.44 precipitation 0.1 90 < th dose independent rect. 17 3
969 66.44 precipitation 0.1 90 < th dose dependent rect. 17 3