Os02g0826000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0826000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211.59 | 0.683 | 5.75 | -0.136 | 0.854 | 1.18 | 0.991 | 1.24 | -0.0569 | 21 | 19.89 | 95 | -- | -- |
| 213.31 | 0.68 | 5.74 | -0.124 | 0.845 | 1.06 | 0.656 | -- | -0.0435 | 20.8 | 18.03 | 94 | -- | -- |
| 214.21 | 0.682 | 5.74 | -0.156 | 0.844 | 1.16 | -- | 0.754 | -0.0552 | 20.9 | 21.07 | 104 | -- | -- |
| 214.65 | 0.682 | 5.74 | -0.15 | 0.834 | 1.04 | -- | -- | -0.0526 | 20.8 | 18.31 | 105 | -- | -- |
| 247.45 | 0.733 | 5.71 | -0.151 | -- | 0.76 | -- | 0.782 | -0.0314 | -- | 21.72 | 289 | -- | -- |
| 229.79 | 0.711 | 5.73 | -0.152 | 0.736 | -- | 0.596 | -- | -0.00778 | 19.1 | -- | -- | -- | -- |
| 230.68 | 0.711 | 5.73 | -0.163 | 0.74 | -- | -- | -- | -0.00589 | 19 | -- | -- | -- | -- |
| 237.61 | 0.718 | 5.73 | -0.222 | -- | 0.776 | -- | -- | -0.0948 | -- | -0.9772 | 766 | -- | -- |
| 215.24 | 0.683 | 5.74 | -- | 0.834 | 1.04 | -- | -- | -0.0363 | 20.8 | 18.66 | 105 | -- | -- |
| 259.41 | 0.753 | 5.71 | -0.178 | -- | -- | -- | -- | -0.0196 | -- | -- | -- | -- | -- |
| 231.38 | 0.712 | 5.72 | -- | 0.741 | -- | -- | -- | 0.0122 | 19 | -- | -- | -- | -- |
| 238.88 | 0.72 | 5.72 | -- | -- | 0.765 | -- | -- | -0.0706 | -- | -50.24 | 766 | -- | -- |
| 260.24 | 0.753 | 5.71 | -- | -- | -- | -- | -- | 0.000121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 204.19 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 3 | 204.84 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 17 |
| 5 | 205.86 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 8 | 206.42 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 9 | 206.53 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 16 | 5 |
| 11 | 206.56 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 12 | 206.61 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 13 | 206.65 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 15 | 206.80 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 27 | 207.29 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 7 |
| 28 | 207.31 | radiation | 20.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 43 | 207.83 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 45 | 207.84 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 47 | 207.95 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 57 | 208.13 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 5 | 3 |
| 86 | 208.24 | humidity | 70.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 87 | 208.29 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 91 | 208.32 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 94 | 208.35 | radiation | 10.0 | 30 | > th | dose independent | rect. | 16 | 16 |
| 100 | 208.48 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 5 |
| 105 | 208.58 | wind | 7.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 107 | 208.64 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 16 | 7 |
| 128 | 208.99 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 10 |
| 153 | 209.07 | radiation | 30.0 | 90 | < th | dose independent | rect. | 11 | 22 |
| 162 | 209.22 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 167 | 209.32 | humidity | 50.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 174 | 209.41 | radiation | 10.0 | 30 | > th | dose independent | rect. | 6 | 2 |
| 188 | 209.45 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 194 | 209.53 | radiation | 20.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 195 | 209.53 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 198 | 209.56 | humidity | 70.0 | 90 | > th | dose independent | sin | 5 | NA |
| 199 | 209.56 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 7 |
| 201 | 209.56 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 207 | 209.65 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 236 | 209.78 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 245 | 209.84 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 246 | 209.84 | radiation | 40.0 | 90 | < th | dose independent | rect. | 1 | 23 |
| 247 | 209.85 | humidity | 90.0 | 10 | < th | dose independent | rect. | 9 | 7 |
| 249 | 209.86 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 275 | 209.98 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 290 | 210.16 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 293 | 210.21 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 4 |
| 294 | 210.21 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 17 |
| 295 | 210.21 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 297 | 210.22 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 302 | 210.24 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 316 | 210.34 | humidity | 70.0 | 90 | < th | dose independent | sin | 5 | NA |
| 317 | 210.34 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 7 |
| 332 | 210.36 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 7 |
| 342 | 210.42 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 349 | 210.49 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 367 | 210.62 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 369 | 210.63 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 2 | 6 |
| 371 | 210.64 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 379 | 210.71 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 387 | 210.79 | wind | 7.0 | 30 | < th | dose independent | rect. | 9 | 17 |
| 394 | 210.83 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 404 | 210.89 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 420 | 210.93 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 447 | 211.01 | temperature | 25.0 | 30 | > th | dose independent | rect. | 2 | 6 |
| 493 | 211.11 | radiation | 30.0 | 90 | < th | dose independent | rect. | 6 | 14 |
| 501 | 211.12 | radiation | 20.0 | 270 | < th | dose independent | sin | 8 | NA |
| 535 | 211.16 | radiation | 20.0 | 90 | > th | dose dependent | sin | 3 | NA |
| 543 | 211.21 | radiation | 10.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 545 | 211.23 | humidity | 80.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 586 | 211.29 | radiation | 40.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 588 | 211.30 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 7 |
| 592 | 211.32 | radiation | 20.0 | 270 | > th | dose independent | sin | 7 | NA |
| 604 | 211.37 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 11 |
| 605 | 211.38 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 7 |
| 608 | 211.38 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 7 |
| 609 | 211.38 | temperature | 10.0 | 10 | > th | dose independent | rect. | 16 | 17 |
| 611 | 211.38 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 625 | 211.44 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 7 |
| 639 | 211.45 | humidity | 50.0 | 10 | > th | dose independent | rect. | 9 | 7 |
| 651 | 211.48 | humidity | 50.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 678 | 211.57 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 17 |
| 697 | 211.58 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 2 |
| 726 | 211.66 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 19 |
| 750 | 211.69 | radiation | 20.0 | 90 | > th | dose dependent | no | NA | NA |
| 863 | 211.73 | wind | 7.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 880 | 211.75 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 16 | 12 |
| 896 | 211.79 | wind | 7.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 935 | 211.89 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 943 | 211.90 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 947 | 211.91 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 953 | 211.93 | wind | 1.0 | 10 | > th | dose independent | rect. | 9 | 21 |
| 954 | 211.93 | radiation | 30.0 | 90 | < th | dose independent | rect. | 21 | 23 |
| 955 | 211.93 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 10 |
| 961 | 211.96 | wind | 9.0 | 10 | < th | dose independent | rect. | 16 | 17 |
| 964 | 211.97 | radiation | 30.0 | 90 | < th | dose independent | sin | 4 | NA |
| 979 | 211.97 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 989 | 211.98 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 13 |
| 998 | 211.99 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 17 |