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Os02g0825500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0202) R2 : 0.0096
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0892 (0.0424) R2dN8 : 0.0124 R2N8 : 0.0096
σ : 0.38
deviance : 66.11
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.46 0.272 10.2 0.641 0.593 0.314 0.214 0.321 0.172 18.1 41.16 15 -- --
33.7 0.27 10.2 0.649 0.592 0.317 0.204 -- 0.172 18 41.17 14 -- --
33.57 0.27 10.2 0.639 0.595 0.311 -- 0.314 0.172 18 41.16 14 -- --
33.8 0.271 10.2 0.646 0.594 0.316 -- -- 0.173 18 41.16 14 -- --
51.9 0.336 10.1 0.617 -- 0.339 -- 0.335 0.16 -- 41.16 14 -- --
36.24 0.282 10.1 0.656 0.605 -- 0.187 -- 0.174 17.5 -- -- -- --
36.32 0.282 10.1 0.655 0.607 -- -- -- 0.175 17.5 -- -- -- --
45.3 0.313 10.1 0.634 -- 0.463 -- -- 0.119 -- 39.21 699 -- --
44.8 0.312 10.2 -- 0.592 0.322 -- -- 0.109 18.1 40 14 -- --
55.47 0.348 10.1 0.635 -- -- -- -- 0.16 -- -- -- -- --
47.64 0.323 10.2 -- 0.596 -- -- -- 0.102 17.5 -- -- -- --
54.87 0.345 10.1 -- -- 0.551 -- -- 0.146 -- 30.25 697 -- --
66.11 0.38 10.2 -- -- -- -- -- 0.0892 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.70 atmosphere 1000.0 10 > th dose dependent rect. 2 7
3 31.00 humidity 90.0 10 < th dose independent rect. 3 6
4 31.02 temperature 10.0 10 > th dose dependent rect. 2 7
6 31.04 wind 5.0 30 < th dose independent rect. 2 7
14 31.25 precipitation 0.1 10 < th dose independent rect. 2 7
15 31.25 precipitation 0.1 10 < th dose dependent rect. 2 7
16 31.30 atmosphere 1005.0 30 > th dose independent rect. 2 7
22 31.38 precipitation 0.1 30 < th dose independent rect. 9 17
23 31.38 precipitation 0.1 30 < th dose dependent rect. 9 17
26 31.43 temperature 10.0 1440 > th dose independent rect. 3 7
29 31.43 atmosphere 995.0 1440 > th dose independent rect. 3 7
30 31.43 temperature 10.0 1440 > th dose independent rect. 10 17
33 31.43 atmosphere 995.0 30 > th dose independent rect. 9 17
35 31.44 temperature 10.0 30 > th dose independent rect. 2 7
37 31.44 temperature 30.0 30 < th dose independent rect. 2 7
38 31.44 humidity 50.0 30 > th dose independent rect. 2 7
40 31.44 atmosphere 995.0 30 > th dose independent rect. 2 7
41 31.44 atmosphere 1015.0 30 < th dose independent rect. 2 7
42 31.44 temperature 10.0 30 > th dose independent rect. 9 17
43 31.45 humidity 50.0 30 > th dose independent rect. 9 17
59 31.57 wind 9.0 30 < th dose dependent rect. 2 7
62 31.61 wind 9.0 30 < th dose independent rect. 9 17
68 31.66 radiation 40.0 30 < th dose independent rect. 2 7
80 31.79 humidity 50.0 1440 > th dose independent rect. 3 7
99 31.92 radiation 40.0 10 < th dose independent rect. 2 18
102 31.93 wind 1.0 30 > th dose independent rect. 9 17
118 32.00 wind 5.0 270 < th dose independent rect. 23 9
143 32.08 wind 1.0 30 > th dose independent rect. 2 7
166 32.16 temperature 10.0 270 > th dose dependent rect. 23 9
173 32.19 temperature 10.0 10 > th dose dependent rect. 15 18
180 32.22 radiation 1.0 10 > th dose independent rect. 9 6
183 32.23 atmosphere 1015.0 30 < th dose independent rect. 9 17
185 32.24 humidity 80.0 10 < th dose independent rect. 9 6
192 32.26 wind 1.0 30 > th dose independent rect. 9 6
198 32.27 precipitation 0.1 10 < th dose independent rect. 15 18
200 32.27 precipitation 0.1 10 < th dose dependent rect. 15 18
201 32.28 temperature 10.0 10 > th dose independent rect. 9 6
203 32.28 atmosphere 995.0 10 > th dose independent rect. 9 6
204 32.28 atmosphere 1015.0 10 < th dose independent rect. 9 6
205 32.28 precipitation 0.1 10 < th dose independent rect. 9 6
206 32.28 temperature 10.0 10 > th dose independent rect. 15 18
209 32.28 precipitation 0.1 10 < th dose dependent rect. 9 6
235 32.33 radiation 40.0 90 < th dose independent rect. 13 19
238 32.33 wind 9.0 10 < th dose dependent rect. 15 18
240 32.34 temperature 10.0 1440 > th dose independent rect. 10 6
244 32.34 wind 9.0 30 < th dose independent rect. 15 18
245 32.34 temperature 10.0 1440 > th dose independent rect. 16 18
270 32.38 humidity 50.0 270 > th dose independent rect. 9 1
276 32.39 wind 9.0 10 < th dose independent rect. 9 6
278 32.40 wind 9.0 270 < th dose independent rect. 9 1
279 32.40 radiation 1.0 270 > th dose independent rect. 9 1
287 32.41 temperature 10.0 270 > th dose independent rect. 9 1
288 32.41 atmosphere 995.0 270 > th dose independent rect. 9 1
289 32.41 atmosphere 1015.0 270 < th dose independent rect. 9 1
290 32.41 precipitation 0.1 270 < th dose independent rect. 9 1
295 32.41 radiation 40.0 10 < th dose independent rect. 12 21
296 32.41 temperature 10.0 270 > th dose independent rect. 10 23
297 32.41 precipitation 0.1 270 < th dose dependent rect. 9 1
303 32.42 humidity 50.0 30 > th dose independent rect. 9 6
309 32.44 radiation 10.0 1440 > th dose independent rect. 11 3
335 32.47 wind 9.0 1440 < th dose independent rect. 3 6
351 32.47 radiation 40.0 30 < th dose independent rect. 15 18
357 32.47 wind 9.0 90 < th dose dependent rect. 14 18
359 32.48 radiation 1.0 1440 < th dose independent rect. 11 1
362 32.48 atmosphere 1015.0 10 < th dose independent rect. 15 18
363 32.48 radiation 1.0 1440 < th dose dependent rect. 11 1
370 32.49 humidity 90.0 720 > th dose dependent rect. 20 5
371 32.50 wind 1.0 270 > th dose independent rect. 9 1
414 32.55 temperature 10.0 270 > th dose dependent rect. 9 1
417 32.56 radiation 40.0 90 < th dose independent rect. 11 22
419 32.56 atmosphere 995.0 30 > th dose dependent rect. 9 17
448 32.60 atmosphere 995.0 10 > th dose independent rect. 15 18
449 32.60 wind 9.0 270 < th dose dependent rect. 9 1
450 32.60 humidity 90.0 720 > th dose dependent rect. 20 3
452 32.60 temperature 10.0 10 > th dose dependent rect. 9 6
479 32.63 wind 9.0 270 < th dose independent rect. 10 23
502 32.65 radiation 20.0 270 < th dose independent rect. 23 9
515 32.66 precipitation 0.1 270 < th dose independent rect. 10 23
519 32.66 precipitation 0.1 270 < th dose dependent rect. 10 23
520 32.67 humidity 90.0 720 < th dose independent rect. 21 1
533 32.67 radiation 1.0 270 > th dose dependent rect. 9 1
553 32.68 wind 9.0 270 < th dose dependent rect. 23 9
555 32.69 atmosphere 1005.0 270 > th dose independent rect. 2 3
564 32.70 atmosphere 1000.0 30 > th dose independent rect. 20 6
583 32.72 radiation 40.0 10 < th dose independent rect. 12 8
602 32.73 radiation 40.0 90 < th dose dependent rect. 2 7
607 32.74 atmosphere 1015.0 1440 < th dose independent rect. 4 6
627 32.76 precipitation 0.1 270 < th dose independent rect. 23 9
632 32.76 precipitation 0.1 270 < th dose dependent rect. 23 9
654 32.78 radiation 1.0 10 > th dose dependent rect. 9 6
659 32.78 radiation 40.0 90 < th dose dependent rect. 2 18
677 32.79 radiation 10.0 1440 < th dose dependent rect. 10 5
689 32.80 wind 9.0 270 < th dose dependent rect. 8 3
715 32.82 radiation 10.0 1440 < th dose dependent rect. 14 1
746 32.84 radiation 20.0 1440 < th dose dependent rect. 12 3
748 32.84 radiation 1.0 90 > th dose dependent rect. 8 5
803 32.87 humidity 50.0 270 > th dose independent rect. 20 15
824 32.88 precipitation 0.1 10 < th dose independent rect. 2 18
830 32.88 precipitation 0.1 10 < th dose dependent rect. 2 18
837 32.89 radiation 40.0 90 < th dose independent rect. 13 7
838 32.89 temperature 10.0 270 > th dose independent rect. 11 9
839 32.89 atmosphere 1015.0 270 < th dose independent rect. 11 9
840 32.89 temperature 10.0 270 > th dose independent rect. 20 15
841 32.89 atmosphere 995.0 270 > th dose independent rect. 20 15
842 32.89 humidity 50.0 10 > th dose independent rect. 15 18
870 32.91 atmosphere 995.0 1440 > th dose independent rect. 10 4
900 32.92 temperature 10.0 270 > th dose independent rect. 23 9
901 32.92 temperature 30.0 270 < th dose independent rect. 23 9
902 32.92 humidity 50.0 270 > th dose independent rect. 23 9
904 32.92 atmosphere 995.0 270 > th dose independent rect. 23 9
905 32.92 precipitation 0.1 270 < th dose independent rect. 11 9
906 32.92 temperature 10.0 270 > th dose independent rect. 8 15
919 32.92 humidity 50.0 30 > th dose dependent rect. 20 6
922 32.92 precipitation 0.1 270 < th dose dependent rect. 11 9
928 32.93 atmosphere 1015.0 270 < th dose independent rect. 23 9
974 32.95 temperature 10.0 1440 > th dose independent rect. 21 6
977 32.95 temperature 30.0 1440 < th dose independent rect. 21 6
982 32.95 humidity 50.0 1440 > th dose independent rect. 21 6
989 32.95 atmosphere 995.0 1440 > th dose independent rect. 21 6
991 32.95 radiation 1.0 1440 < th dose independent rect. 21 6