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Os02g0825100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.34 (0.0206) R2 : 0.0075
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0806 (0.0434) R2dN8 : 0.00968 R2N8 : 0.0075
σ : 0.389
deviance : 69.3
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
47.98 0.325 8.34 0.419 0.45 -0.502 0.525 0.0179 0.119 18.3 84.67 1258 -- --
47.85 0.322 8.34 0.412 0.442 -0.512 0.57 -- 0.111 18.4 83.86 1212 -- --
48.5 0.324 8.34 0.406 0.455 -0.496 -- -0.0208 0.113 18.5 83.52 1188 -- --
48.47 0.324 8.34 0.422 0.464 -0.522 -- -- 0.124 18.5 84 1172 -- --
59.22 0.358 8.33 0.418 -- -0.562 -- 0.143 0.103 -- 85 1273 -- --
53.48 0.343 8.34 0.347 0.481 -- 0.566 -- 0.126 17.6 -- -- -- --
54.27 0.345 8.34 0.344 0.484 -- -- -- 0.129 17.6 -- -- -- --
59.18 0.358 8.33 0.4 -- -0.553 -- -- 0.114 -- 86 1280 -- --
52.76 0.338 8.34 -- 0.454 -0.499 -- -- 0.104 18.5 140.5 1213 -- --
66.45 0.381 8.33 0.328 -- -- -- -- 0.117 -- -- -- -- --
57.39 0.354 8.34 -- 0.479 -- -- -- 0.0904 17.7 -- -- -- --
63 0.37 8.33 -- -- -0.529 -- -- 0.0983 -- 151.9 1289 -- --
69.3 0.389 8.34 -- -- -- -- -- 0.0806 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.15 wind 3.0 4320 > th dose independent rect. 8 1
2 47.18 humidity 90.0 720 > th dose dependent rect. 20 3
5 47.41 wind 3.0 4320 < th dose independent rect. 8 1
6 47.55 humidity 80.0 14400 < th dose dependent rect. 6 1
11 47.77 humidity 50.0 720 > th dose dependent rect. 17 7
12 47.80 radiation 40.0 10 < th dose independent rect. 2 18
15 47.82 humidity 80.0 14400 < th dose independent rect. 5 2
18 47.85 humidity 80.0 1440 < th dose independent rect. 2 13
22 47.87 humidity 80.0 14400 < th dose dependent rect. 22 10
23 47.87 humidity 80.0 720 < th dose dependent rect. 17 15
26 47.90 humidity 80.0 1440 < th dose independent rect. 6 9
41 47.95 humidity 80.0 14400 < th dose dependent rect. 1 7
53 48.01 humidity 80.0 1440 > th dose independent rect. 1 15
59 48.03 radiation 30.0 14400 > th dose independent rect. 16 1
77 48.04 humidity 80.0 1440 < th dose independent sin 2 NA
78 48.04 radiation 40.0 90 < th dose independent rect. 2 17
79 48.04 humidity 70.0 720 > th dose dependent rect. 19 2
89 48.07 atmosphere 1005.0 10 > th dose independent rect. 2 7
90 48.07 humidity 80.0 14400 < th dose independent rect. 22 10
93 48.08 humidity 80.0 1440 > th dose independent rect. 11 3
96 48.09 atmosphere 1000.0 10 > th dose dependent rect. 2 7
99 48.10 radiation 1.0 1440 < th dose independent rect. 11 1
102 48.10 radiation 1.0 1440 < th dose dependent rect. 11 1
105 48.11 humidity 80.0 720 < th dose dependent rect. 17 11
117 48.13 humidity 80.0 1440 > th dose independent rect. 5 11
126 48.14 atmosphere 1000.0 90 > th dose dependent rect. 2 6
131 48.15 humidity 80.0 14400 < th dose dependent rect. 22 1
139 48.18 humidity 80.0 14400 > th dose independent rect. 4 3
153 48.21 humidity 80.0 1440 < th dose independent rect. 11 3
154 48.21 humidity 80.0 14400 < th dose independent rect. 22 3
178 48.25 humidity 80.0 1440 > th dose independent sin 1 NA
190 48.27 humidity 80.0 14400 > th dose independent rect. 5 1
214 48.30 radiation 30.0 14400 > th dose dependent rect. 16 1
242 48.33 radiation 1.0 1440 < th dose independent rect. 9 4
248 48.33 radiation 1.0 1440 < th dose dependent rect. 9 4
259 48.35 radiation 30.0 4320 > th dose independent rect. 7 1
264 48.35 humidity 60.0 14400 > th dose independent rect. 3 5
267 48.35 radiation 1.0 1440 < th dose independent rect. 8 6
278 48.35 humidity 80.0 720 < th dose dependent sin 12 NA
280 48.35 radiation 1.0 1440 < th dose dependent rect. 8 6
284 48.36 humidity 80.0 14400 > th dose independent rect. 22 9
327 48.39 atmosphere 1005.0 270 > th dose independent rect. 24 6
331 48.39 humidity 70.0 1440 > th dose dependent rect. 12 1
350 48.42 radiation 30.0 14400 < th dose independent rect. 17 4
363 48.43 humidity 50.0 720 > th dose dependent rect. 16 14
399 48.47 humidity 80.0 720 < th dose dependent rect. 20 1
400 48.47 radiation 1.0 270 < th dose dependent rect. 5 20
424 48.51 humidity 50.0 720 > th dose dependent sin 14 NA
453 48.55 wind 3.0 90 < th dose independent rect. 2 6
470 48.57 radiation 20.0 14400 < th dose independent rect. 3 3
481 48.58 wind 3.0 43200 < th dose independent rect. 2 1
499 48.59 wind 7.0 30 < th dose dependent rect. 2 7
519 48.62 humidity 90.0 720 > th dose independent rect. 20 3
526 48.62 wind 5.0 10 < th dose independent rect. 2 7
532 48.62 radiation 30.0 4320 < th dose independent rect. 21 11
541 48.62 humidity 80.0 1440 > th dose independent rect. 21 21
547 48.63 radiation 1.0 1440 > th dose independent rect. 13 1
548 48.63 radiation 1.0 1440 > th dose independent rect. 8 6
551 48.63 humidity 80.0 1440 > th dose independent rect. 21 19
573 48.64 humidity 70.0 1440 > th dose dependent rect. 11 3
582 48.65 radiation 1.0 1440 > th dose independent rect. 11 3
584 48.65 precipitation 0.1 10 < th dose independent rect. 2 7
596 48.65 precipitation 0.1 10 < th dose dependent rect. 2 7
599 48.66 radiation 30.0 4320 < th dose independent rect. 6 2
603 48.66 humidity 80.0 720 < th dose dependent rect. 17 2
604 48.66 radiation 10.0 1440 < th dose dependent rect. 12 5
628 48.68 radiation 30.0 14400 < th dose independent rect. 17 13
629 48.68 radiation 1.0 270 < th dose independent rect. 5 21
633 48.68 radiation 20.0 4320 > th dose dependent rect. 6 2
688 48.73 humidity 50.0 1440 < th dose independent rect. 15 2
714 48.74 atmosphere 1000.0 10 > th dose independent rect. 2 18
715 48.74 humidity 50.0 1440 < th dose independent rect. 15 20
760 48.76 radiation 10.0 1440 < th dose dependent rect. 12 13
766 48.77 humidity 50.0 1440 < th dose independent sin 12 NA
772 48.77 radiation 10.0 1440 > th dose independent rect. 11 20
808 48.79 humidity 90.0 720 > th dose dependent rect. 9 15
809 48.80 humidity 50.0 1440 > th dose independent rect. 15 2
828 48.81 humidity 90.0 1440 < th dose dependent rect. 11 21
841 48.83 humidity 50.0 1440 > th dose independent sin 13 NA
864 48.84 humidity 50.0 1440 > th dose independent rect. 15 12
881 48.85 humidity 50.0 1440 > th dose independent rect. 15 10
885 48.85 humidity 50.0 1440 > th dose independent rect. 15 16
889 48.85 humidity 50.0 1440 < th dose dependent rect. 16 1
905 48.86 humidity 50.0 1440 > th dose independent rect. 15 7
910 48.86 humidity 50.0 30 > th dose independent rect. 9 17
913 48.86 humidity 50.0 1440 > th dose independent rect. 15 19
915 48.86 humidity 80.0 1440 < th dose independent rect. 6 21
917 48.86 humidity 50.0 1440 < th dose independent rect. 15 22
918 48.86 wind 1.0 4320 > th dose dependent rect. 8 1
935 48.87 humidity 80.0 1440 < th dose independent rect. 17 23
940 48.87 humidity 60.0 1440 < th dose dependent rect. 15 3
944 48.87 humidity 60.0 1440 < th dose dependent rect. 15 18
946 48.88 wind 3.0 14400 > th dose independent rect. 2 2
993 48.89 wind 9.0 43200 > th dose dependent rect. 13 1