Os02g0824900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0824900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.19 | 0.385 | 8.15 | 0.799 | 1.97 | 0.997 | -2.59 | -4.68 | 0.0471 | 18.7 | 1.31 | 826 | -- | -- |
| 73.46 | 0.402 | 8.16 | 0.612 | 1.23 | 0.118 | 0.604 | -- | -0.0362 | 18.3 | 7.726e-07 | 1044 | -- | -- |
| 69.12 | 0.387 | 8.17 | 0.694 | 2.1 | 1.16 | -- | -1.26 | 0.0174 | 18.6 | 1.41 | 831 | -- | -- |
| 69.95 | 0.39 | 8.16 | 0.709 | 2.19 | 1.36 | -- | -- | 0.0247 | 19 | 1.078 | 942 | -- | -- |
| 152.07 | 0.577 | 8.14 | 0.566 | -- | 0.245 | -- | -0.306 | -0.0604 | -- | 1.41 | 831 | -- | -- |
| 73.79 | 0.403 | 8.17 | 0.602 | 1.27 | -- | 0.49 | -- | -0.0445 | 18.7 | -- | -- | -- | -- |
| 74.39 | 0.404 | 8.17 | 0.594 | 1.28 | -- | -- | -- | -0.0433 | 18.7 | -- | -- | -- | -- |
| 134.68 | 0.541 | 8.1 | 0.354 | -- | -0.511 | -- | -- | -0.114 | -- | 44.65 | 807 | -- | -- |
| 82.4 | 0.423 | 8.19 | -- | 2.04 | 1.14 | -- | -- | -0.0529 | 19 | 1.39 | 922 | -- | -- |
| 159.3 | 0.59 | 8.14 | 0.565 | -- | -- | -- | -- | -0.0686 | -- | -- | -- | -- | -- |
| 83.7 | 0.428 | 8.18 | -- | 1.27 | -- | -- | -- | -0.109 | 18.7 | -- | -- | -- | -- |
| 136.66 | 0.544 | 8.16 | -- | -- | -0.594 | -- | -- | -0.189 | -- | 42.91 | 804 | -- | -- |
| 167.72 | 0.604 | 8.16 | -- | -- | -- | -- | -- | -0.131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.36 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 14 |
| 4 | 61.41 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 14 |
| 16 | 61.83 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 11 |
| 44 | 62.19 | temperature | 25 | 10 | < th | dose dependent | sin | 15 | NA |
| 67 | 62.63 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 12 |
| 75 | 62.75 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 5 |
| 82 | 62.82 | temperature | 25 | 270 | > th | dose independent | rect. | 14 | 9 |
| 83 | 62.82 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 2 |
| 94 | 62.89 | temperature | 25 | 720 | < th | dose independent | rect. | 12 | 8 |
| 218 | 63.62 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 334 | 64.18 | temperature | 25 | 720 | < th | dose independent | sin | 19 | NA |
| 335 | 64.18 | radiation | 1 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 344 | 64.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 355 | 64.26 | temperature | 25 | 270 | > th | dose independent | sin | 16 | NA |
| 363 | 64.30 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 10 |
| 366 | 64.31 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 421 | 64.47 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 423 | 64.47 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 436 | 64.52 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 438 | 64.52 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 4 |
| 457 | 64.58 | humidity | 80 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 467 | 64.61 | humidity | 80 | 720 | > th | dose dependent | rect. | 10 | 14 |
| 500 | 64.70 | radiation | 1 | 720 | < th | dose dependent | rect. | 9 | 15 |
| 546 | 64.83 | temperature | 30 | 720 | < th | dose dependent | sin | 20 | NA |
| 560 | 64.87 | humidity | 90 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 566 | 64.89 | radiation | 1 | 720 | < th | dose dependent | rect. | 12 | 12 |
| 575 | 64.91 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 8 |
| 614 | 64.99 | temperature | 25 | 90 | < th | dose independent | rect. | 19 | 8 |
| 633 | 65.03 | radiation | 1 | 720 | < th | dose independent | rect. | 12 | 6 |
| 634 | 65.03 | radiation | 1 | 720 | < th | dose independent | rect. | 10 | 8 |
| 664 | 65.07 | radiation | 1 | 720 | > th | dose independent | rect. | 9 | 20 |
| 697 | 65.11 | radiation | 1 | 720 | < th | dose independent | rect. | 9 | 15 |
| 734 | 65.16 | humidity | 80 | 720 | > th | dose independent | rect. | 11 | 13 |
| 761 | 65.19 | temperature | 20 | 10 | > th | dose dependent | sin | 14 | NA |
| 779 | 65.20 | humidity | 80 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 790 | 65.21 | radiation | 1 | 720 | > th | dose independent | rect. | 9 | 10 |
| 806 | 65.22 | humidity | 90 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 820 | 65.24 | radiation | 1 | 720 | < th | dose dependent | rect. | 10 | 8 |
| 867 | 65.32 | radiation | 1 | 720 | < th | dose independent | rect. | 12 | 12 |
| 878 | 65.33 | temperature | 25 | 10 | > th | dose independent | sin | 14 | NA |
| 943 | 65.41 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 976 | 65.46 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 9 |