Os02g0824100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os02g0824100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 179.81 | 0.63 | 7.77 | 0.994 | 0.765 | -1.92 | 0.282 | -1.51 | -0.567 | 10.2 | 21.42 | 1392 | -- | -- |
| 180.78 | 0.626 | 7.73 | 1.18 | 0.619 | -1.54 | 0.29 | -- | -0.472 | 9.82 | 22.2 | 1105 | -- | -- |
| 180.13 | 0.625 | 7.77 | 1 | 0.764 | -1.92 | -- | -1.52 | -0.567 | 10.2 | 21.42 | 1391 | -- | -- |
| 180.79 | 0.626 | 7.73 | 1.18 | 0.571 | -1.55 | -- | -- | -0.471 | 9.98 | 22.22 | 1040 | -- | -- |
| 198.78 | 0.657 | 7.78 | 1.03 | -- | -1.82 | -- | -1 | -0.537 | -- | 21.63 | 890 | -- | -- |
| 279.94 | 0.784 | 7.84 | 0.643 | 0.807 | -- | 0.215 | -- | -0.997 | 10.5 | -- | -- | -- | -- |
| 280.13 | 0.784 | 7.84 | 0.652 | 0.805 | -- | -- | -- | -0.996 | 10.6 | -- | -- | -- | -- |
| 196.71 | 0.653 | 7.73 | 1.18 | -- | -1.64 | -- | -- | -0.436 | -- | 22.2 | 859 | -- | -- |
| 213.65 | 0.681 | 7.78 | -- | 0.542 | -1.27 | -- | -- | -0.671 | 10.3 | 22.4 | 855 | -- | -- |
| 319.97 | 0.836 | 7.86 | 0.638 | -- | -- | -- | -- | -1 | -- | -- | -- | -- | -- |
| 291.34 | 0.798 | 7.86 | -- | 0.801 | -- | -- | -- | -1.07 | 10.5 | -- | -- | -- | -- |
| 230.8 | 0.708 | 7.78 | -- | -- | -1.41 | -- | -- | -0.633 | -- | 22.4 | 846 | -- | -- |
| 330.69 | 0.849 | 7.88 | -- | -- | -- | -- | -- | -1.07 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 182.89 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 2 | 184.51 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 5 | 187.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 18 | 188.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 33 | 188.66 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 62 | 189.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 64 | 189.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 65 | 189.55 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 74 | 189.73 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 92 | 190.05 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 123 | 190.51 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 143 | 190.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 167 | 191.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 271 | 192.67 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 351 | 193.83 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 357 | 193.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 418 | 194.47 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 477 | 195.07 | wind | 9 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 547 | 195.73 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 569 | 196.04 | wind | 9 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 570 | 196.05 | wind | 9 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 612 | 196.46 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 657 | 197.02 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 662 | 197.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 725 | 197.90 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 796 | 198.66 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 812 | 198.92 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 857 | 199.40 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 971 | 200.46 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |