Os02g0823800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0823800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.22 | 0.195 | 9.15 | 0.869 | 0.616 | 0.786 | -0.265 | -0.648 | 0.253 | 4.2 | 30.87 | 329 | -- | -- |
| 17.46 | 0.195 | 9.16 | 0.768 | 0.624 | 0.809 | -0.445 | -- | 0.229 | 3.95 | 30.49 | 390 | -- | -- |
| 17.34 | 0.194 | 9.15 | 0.899 | 0.612 | 0.767 | -- | -0.85 | 0.264 | 4.41 | 30.65 | 299 | -- | -- |
| 17.91 | 0.197 | 9.16 | 0.763 | 0.64 | 0.75 | -- | -- | 0.236 | 4.26 | 28.68 | 342 | -- | -- |
| 31.59 | 0.262 | 9.14 | 0.999 | -- | 1.35 | -- | -0.809 | 0.317 | -- | 32.58 | 239 | -- | -- |
| 25.25 | 0.236 | 9.19 | 0.568 | 0.841 | -- | -0.281 | -- | 0.0789 | 4.45 | -- | -- | -- | -- |
| 25.46 | 0.236 | 9.19 | 0.57 | 0.841 | -- | -- | -- | 0.0804 | 4.5 | -- | -- | -- | -- |
| 32.2 | 0.264 | 9.15 | 0.869 | -- | 1.32 | -- | -- | 0.322 | -- | 31.21 | 246 | -- | -- |
| 31.49 | 0.263 | 9.19 | -- | 0.75 | 0.403 | -- | -- | 0.0891 | 4.88 | 28.68 | 342 | -- | -- |
| 63.21 | 0.371 | 9.2 | 0.603 | -- | -- | -- | -- | 0.103 | -- | -- | -- | -- | -- |
| 34.03 | 0.273 | 9.21 | -- | 0.851 | -- | -- | -- | 0.0169 | 4.49 | -- | -- | -- | -- |
| 52.18 | 0.336 | 9.19 | -- | -- | 1.14 | -- | -- | 0.162 | -- | 37.07 | 242 | -- | -- |
| 72.8 | 0.398 | 9.21 | -- | -- | -- | -- | -- | 0.0357 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 2 | 16.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 4 | 16.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 14 |
| 6 | 16.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 17 |
| 26 | 16.79 | temperature | 30 | 720 | < th | dose dependent | sin | 17 | NA |
| 44 | 16.89 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 47 | 16.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 10 |
| 71 | 17.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 132 | 17.20 | temperature | 10 | 720 | > th | dose dependent | sin | 18 | NA |
| 133 | 17.20 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 169 | 17.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 175 | 17.30 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 221 | 17.37 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 222 | 17.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 237 | 17.40 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 264 | 17.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 276 | 17.44 | temperature | 30 | 270 | < th | dose dependent | sin | 12 | NA |
| 315 | 17.49 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 316 | 17.50 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 333 | 17.51 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 334 | 17.52 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 372 | 17.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 14 |
| 390 | 17.58 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 406 | 17.60 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 424 | 17.62 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 500 | 17.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 501 | 17.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 502 | 17.68 | temperature | 10 | 270 | > th | dose dependent | sin | 13 | NA |
| 667 | 17.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 687 | 17.75 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 752 | 17.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 14 |
| 773 | 17.79 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 798 | 17.80 | temperature | 25 | 720 | < th | dose independent | rect. | 9 | 14 |
| 895 | 17.82 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 926 | 17.83 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 928 | 17.83 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |