Os02g0823600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0823600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18 | 0.199 | 12.5 | 0.117 | 0.189 | -0.736 | 0.486 | -1.8 | 0.1 | 12.6 | 9.79 | 109 | -- | -- |
| 19.95 | 0.208 | 12.4 | 0.377 | 0.181 | -0.738 | 0.151 | -- | 0.168 | 11.9 | 9.747 | 101 | -- | -- |
| 18.74 | 0.202 | 12.5 | 0.176 | 0.151 | -0.693 | -- | -1.42 | 0.107 | 12.7 | 8.141 | 175 | -- | -- |
| 20.04 | 0.209 | 12.4 | 0.384 | 0.179 | -0.741 | -- | -- | 0.168 | 12.1 | 9.797 | 107 | -- | -- |
| 19.2 | 0.204 | 12.5 | 0.0797 | -- | -0.554 | -- | -1.72 | 0.0764 | -- | 7.794 | 465 | -- | -- |
| 25.16 | 0.235 | 12.5 | 0.226 | 0.157 | -- | 0.309 | -- | 0.0662 | 7.09 | -- | -- | -- | -- |
| 25.41 | 0.236 | 12.5 | 0.232 | 0.158 | -- | -- | -- | 0.0654 | 7.03 | -- | -- | -- | -- |
| 20.62 | 0.212 | 12.5 | 0.349 | -- | -0.49 | -- | -- | 0.151 | -- | 19.69 | 328 | -- | -- |
| 22.7 | 0.222 | 12.5 | -- | 0.177 | -0.474 | -- | -- | 0.0961 | 11.2 | 21.08 | 69 | -- | -- |
| 26.73 | 0.242 | 12.5 | 0.235 | -- | -- | -- | -- | 0.0683 | -- | -- | -- | -- | -- |
| 26.83 | 0.242 | 12.5 | -- | 0.161 | -- | -- | -- | 0.0396 | 6.94 | -- | -- | -- | -- |
| 23.53 | 0.226 | 12.5 | -- | -- | -0.409 | -- | -- | 0.098 | -- | 21.33 | 309 | -- | -- |
| 28.19 | 0.248 | 12.5 | -- | -- | -- | -- | -- | 0.0422 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.09 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 3 | 17.43 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 24 | 17.91 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 31 | 18.01 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 32 | 18.02 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 38 | 18.04 | temperature | 15 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 53 | 18.15 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 56 | 18.16 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 95 | 18.31 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 99 | 18.34 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 121 | 18.42 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 126 | 18.42 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 143 | 18.48 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 155 | 18.52 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 202 | 18.67 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 203 | 18.68 | temperature | 10 | 270 | > th | dose dependent | sin | 5 | NA |
| 219 | 18.72 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 253 | 18.82 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 254 | 18.83 | temperature | 10 | 90 | > th | dose dependent | sin | 2 | NA |
| 266 | 18.84 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 331 | 18.97 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 398 | 19.09 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 456 | 19.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 484 | 19.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 494 | 19.21 | temperature | 30 | 270 | < th | dose dependent | sin | 6 | NA |
| 535 | 19.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 604 | 19.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 605 | 19.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 13 |
| 645 | 19.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 747 | 19.37 | temperature | 30 | 90 | < th | dose dependent | sin | 1 | NA |
| 776 | 19.38 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 789 | 19.39 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 825 | 19.40 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 947 | 19.46 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 16 |