Os02g0823400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to S-adenosyl-L-methionine: beta-alanine N-methyltransferase (Fragment).
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Os02g0823400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to S-adenosyl-L-methionine: beta-alanine N-methyltransferase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.24 | 0.371 | 12 | 1.13 | 1.57 | -2.14 | -1.98 | 1.66 | 0.356 | 21.2 | 10.33 | 84 | -- | -- |
| 64.63 | 0.374 | 12 | 0.938 | 1.59 | -2.06 | -1.96 | -- | 0.319 | 21.2 | 14.31 | 90 | -- | -- |
| 74.94 | 0.403 | 12 | 1.3 | 1.55 | -2.1 | -- | 2.52 | 0.386 | 21.4 | 10.82 | 64 | -- | -- |
| 80.65 | 0.418 | 12.1 | 0.953 | 1.6 | -2.04 | -- | -- | 0.278 | 21.4 | 13.58 | 104 | -- | -- |
| 192.44 | 0.65 | 11.9 | 1.48 | -- | -2.74 | -- | 3.1 | 0.48 | -- | 10.82 | 64 | -- | -- |
| 108.9 | 0.489 | 12.1 | 0.467 | 1.72 | -- | -1.75 | -- | -0.00859 | 22.5 | -- | -- | -- | -- |
| 121.18 | 0.516 | 12.1 | 0.535 | 1.72 | -- | -- | -- | -0.00562 | 22.7 | -- | -- | -- | -- |
| 200.43 | 0.662 | 12 | 1.05 | -- | -2.71 | -- | -- | 0.362 | -- | 9.568 | 5 | -- | -- |
| 102.12 | 0.471 | 12.1 | -- | 1.6 | -1.56 | -- | -- | 0.118 | 21.8 | 13.72 | 94 | -- | -- |
| 304.8 | 0.816 | 12.1 | 0.569 | -- | -- | -- | -- | 0.00399 | -- | -- | -- | -- | -- |
| 128.72 | 0.531 | 12.1 | -- | 1.73 | -- | -- | -- | -0.0652 | 22.7 | -- | -- | -- | -- |
| 227.99 | 0.703 | 12 | -- | -- | -2.36 | -- | -- | 0.21 | -- | 12.66 | 2 | -- | -- |
| 313.33 | 0.826 | 12.1 | -- | -- | -- | -- | -- | -0.0591 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.99 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 6 | 61.76 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 8 | 62.10 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 9 | 62.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 11 | 62.27 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 13 | 62.49 | temperature | 30 | 10 | < th | dose dependent | sin | 16 | NA |
| 23 | 63.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 26 | 63.18 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 27 | 63.20 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 32 | 63.34 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 40 | 63.45 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 53 | 64.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 55 | 64.64 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 57 | 64.75 | temperature | 10 | 10 | > th | dose dependent | sin | 16 | NA |
| 58 | 64.75 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 61 | 64.83 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 62 | 64.84 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 88 | 65.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 99 | 65.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 102 | 65.77 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 145 | 66.37 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 15 |
| 155 | 66.44 | temperature | 15 | 720 | > th | dose dependent | sin | 21 | NA |
| 158 | 66.45 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 198 | 66.77 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 215 | 66.94 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 228 | 67.03 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 231 | 67.05 | temperature | 30 | 720 | < th | dose dependent | sin | 22 | NA |
| 257 | 67.21 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 363 | 68.05 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 448 | 68.76 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 576 | 69.55 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 647 | 69.97 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 673 | 70.06 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 890 | 71.21 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |