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Os02g0823100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Plasma membrane intrinsic protein (Plasma membrane integral protein ZmPIP1-5).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0417) R2 : 0.65
β1 : 2.14 (0.156) R2dD : 0.164 R2D : 0.0663
β2 : 1.17 (0.119) R2dC : 0.0991 R2C : 0.251
β3 : -3.34 (0.194) R2dE : 0.335 R2E : 0.373
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.405 (0.0932) R2dN8 : 0.0267 R2N8 : -0.0334
σ : 0.772
deviance : 274.48
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C
peak time of C : 7.77
E
wheather : temperature
threshold : 18.65
memory length : 368
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 12.7
open length of G : 20.3

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
255.48 0.751 12.5 1.51 1.41 -3 1.82 -3.43 0.278 8.08 18.8 307 13.8 19.7
261.18 0.753 12.5 1.97 1.42 -3.12 2.37 -- 0.319 8.2 19.26 324 13.6 19.9
259.77 0.751 12.6 1.42 1.37 -3.12 -- -4.88 0.269 7.41 17.74 334 13.5 19.6
274.48 0.772 12.5 2.14 1.17 -3.34 -- -- 0.405 7.77 18.65 368 12.7 20.3
312.46 0.823 12.5 1.58 -- -4.04 -- -4.43 0.435 -- 18.5 390 12.2 20.2
429.05 0.971 12.5 1.46 2.16 -- 3.02 -- -0.0408 8.39 -- -- -- --
457.66 1 12.5 1.55 2.16 -- -- -- -0.0422 8.35 -- -- -- --
321.03 0.834 12.5 2.3 -- -4.08 -- -- 0.571 -- 19.38 388 12.1 20.1
394.44 0.925 12.5 -- 1.24 -2.96 -- -- 0.235 8.24 19.31 335 12.9 20.2
715.76 1.25 12.6 1.56 -- -- -- -- -0.0194 -- -- -- -- --
521.11 1.07 12.6 -- 2.16 -- -- -- -0.215 8.29 -- -- -- --
409.36 0.942 12.6 -- -- -3.3 -- -- 0.0575 -- 18.12 227 14.5 11
780.33 1.3 12.6 -- -- -- -- -- -0.193 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 262.49 temperature 20 270 > th dose dependent rect. 14 20
3 263.66 temperature 15 270 > th dose dependent rect. 13 22
25 273.86 temperature 20 1440 > th dose dependent rect. 18 16
27 274.14 temperature 20 1440 > th dose dependent rect. 1 8
36 274.52 temperature 20 1440 > th dose dependent rect. 24 10
59 275.67 temperature 20 1440 > th dose dependent sin 9 NA
90 278.09 temperature 15 4320 > th dose dependent rect. 21 1
94 278.23 temperature 10 720 > th dose dependent rect. 7 19
96 278.27 temperature 20 1440 > th dose dependent rect. 6 1
97 278.32 temperature 20 720 > th dose dependent rect. 21 22
99 278.55 temperature 30 4320 < th dose dependent rect. 21 1
106 278.88 temperature 20 1440 > th dose dependent rect. 18 8
107 278.90 temperature 20 1440 > th dose dependent rect. 19 3
114 279.08 temperature 20 1440 > th dose dependent rect. 18 10
120 279.26 temperature 20 1440 > th dose dependent rect. 18 5
197 280.63 temperature 30 1440 < th dose dependent rect. 18 16
229 281.05 temperature 15 270 > th dose dependent sin 16 NA
233 281.07 temperature 10 720 > th dose dependent rect. 21 22
393 282.77 temperature 20 720 > th dose dependent no NA NA
448 283.14 temperature 30 270 < th dose dependent rect. 10 17
477 283.34 temperature 30 1440 < th dose dependent rect. 3 6
515 283.59 temperature 30 1440 < th dose dependent rect. 1 9
599 284.11 temperature 30 1440 < th dose dependent sin 10 NA
634 284.30 temperature 30 720 < th dose dependent rect. 4 18
660 284.42 temperature 30 1440 < th dose dependent rect. 17 11
887 285.77 temperature 20 270 > th dose dependent rect. 14 12