Os02g0822400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os02g0822400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.71 | 0.229 | 12.7 | 1.02 | 0.504 | 1.57 | -0.294 | -0.667 | 0.246 | 13.9 | 29.5 | 30 | -- | -- |
| 24.09 | 0.229 | 12.7 | 0.904 | 0.481 | 1.58 | -0.0986 | -- | 0.207 | 14.2 | 28.94 | 66 | -- | -- |
| 23.95 | 0.228 | 12.7 | 0.982 | 0.499 | 1.57 | -- | -0.446 | 0.241 | 14 | 29.41 | 32 | -- | -- |
| 24.06 | 0.228 | 12.7 | 0.913 | 0.488 | 1.57 | -- | -- | 0.215 | 14.3 | 29.07 | 68 | -- | -- |
| 26.88 | 0.241 | 12.7 | 1.08 | -- | 1.48 | -- | -0.486 | 0.225 | -- | 24.9 | 1330 | -- | -- |
| 58.28 | 0.358 | 12.8 | 0.532 | 0.0132 | -- | -0.247 | -- | -0.103 | 12 | -- | -- | -- | -- |
| 58.39 | 0.358 | 12.8 | 0.521 | 0.0555 | -- | -- | -- | -0.106 | 6.97 | -- | -- | -- | -- |
| 27.03 | 0.242 | 12.7 | 0.954 | -- | 1.56 | -- | -- | 0.21 | -- | 24.42 | 1317 | -- | -- |
| 43.54 | 0.309 | 12.8 | -- | 0.37 | 1.19 | -- | -- | 0.0449 | 13.5 | 29.07 | 68 | -- | -- |
| 58.56 | 0.358 | 12.8 | 0.522 | -- | -- | -- | -- | -0.105 | -- | -- | -- | -- | -- |
| 65.54 | 0.379 | 12.8 | -- | 0.0619 | -- | -- | -- | -0.164 | 6.44 | -- | -- | -- | -- |
| 46.91 | 0.319 | 12.8 | -- | -- | 1.04 | -- | -- | 0.0249 | -- | 25.57 | 360 | -- | -- |
| 65.74 | 0.378 | 12.8 | -- | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.58 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 3 | 23.64 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 5 | 23.80 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 8 | 23.90 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 10 | 24.16 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 11 | 24.18 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 14 | 24.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 17 | 24.39 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 18 | 24.40 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 22 | 24.48 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 26 | 24.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 32 | 24.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 3 |
| 38 | 24.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 43 | 24.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 50 | 25.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 67 | 25.18 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 68 | 25.20 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 76 | 25.27 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 83 | 25.32 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 84 | 25.34 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 98 | 25.49 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 128 | 25.77 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 147 | 25.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 158 | 25.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 181 | 26.05 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 21 |
| 213 | 26.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 267 | 26.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 338 | 26.53 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 377 | 26.63 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 415 | 26.69 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 578 | 27.06 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 581 | 27.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 602 | 27.11 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 609 | 27.12 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 624 | 27.14 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 656 | 27.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 715 | 27.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 733 | 27.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 760 | 27.39 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 822 | 27.51 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 20 |