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Os02g0821800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Fibrillarin (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.0264) R2 : 0.688
β1 : 1.66 (0.0965) R2dD : 0.21 R2D : 0.174
β2 : 1.86 (0.0688) R2dC : 0.5 R2C : 0.477
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.298 (0.0563) R2dN8 : 0.0258 R2N8 : -0.0116
σ : 0.496
deviance : 111.99
__
_____
C
peak time of C : 17.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
102.06 0.475 12.5 0.0545 1.82 -1.02 0.859 9.95 0.218 17.9 30.1 4145 -- --
107.21 0.482 12.3 1.44 1.87 -0.436 0.886 -- 0.202 17.9 19.03 2940 -- --
103.84 0.475 12.5 0.0364 1.83 -1.02 -- 10 0.221 17.8 30.1 4144 -- --
108.95 0.486 12.3 1.43 1.87 -0.448 -- -- 0.201 17.8 19 2893 -- --
267.93 0.767 12.3 1.63 -- -0.707 -- -1.12 0.293 -- 30.1 4144 -- --
110.03 0.492 12.3 1.67 1.85 -- 0.901 -- 0.295 17.9 -- -- -- --
111.99 0.496 12.3 1.66 1.86 -- -- -- 0.298 17.8 -- -- -- --
268.27 0.766 12.3 1.53 -- -0.788 -- -- 0.282 -- 30.1 4144 -- --
120.23 0.511 12.4 -- 1.86 -1.35 -- -- -0.152 17.8 16.8 47520 -- --
290.65 0.797 12.3 1.6 -- -- -- -- 0.255 -- -- -- -- --
184.66 0.636 12.4 -- 1.83 -- -- -- 0.114 17.9 -- -- -- --
299.31 0.806 12.4 -- -- -1.25 -- -- -0.207 -- 18.02 47520 -- --
358.49 0.884 12.3 -- -- -- -- -- 0.0771 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 91.51 radiation 1.0 90 > th dose independent rect. 18 14
2 91.66 wind 5.0 270 < th dose independent rect. 3 4
3 91.81 atmosphere 1000.0 270 > th dose independent rect. 19 8
4 91.82 radiation 1.0 30 > th dose independent rect. 5 4
15 91.83 wind 5.0 270 < th dose independent rect. 4 1
30 92.25 temperature 10.0 90 > th dose dependent rect. 4 4
45 92.51 precipitation 0.1 270 < th dose independent rect. 3 4
46 92.51 precipitation 0.1 270 < th dose dependent rect. 3 4
48 92.59 temperature 10.0 10 > th dose dependent rect. 5 4
53 92.86 wind 9.0 270 < th dose independent rect. 7 20
56 92.89 radiation 30.0 90 < th dose independent rect. 4 5
58 92.89 wind 9.0 10 < th dose dependent rect. 5 4
60 92.95 wind 9.0 270 < th dose dependent rect. 3 4
62 92.97 temperature 10.0 30 > th dose dependent rect. 9 19
69 93.11 wind 9.0 270 < th dose dependent rect. 4 1
70 93.12 precipitation 0.1 270 < th dose independent rect. 4 1
71 93.12 precipitation 0.1 270 < th dose dependent rect. 4 1
73 93.14 wind 9.0 10 < th dose independent rect. 9 20
81 93.20 temperature 10.0 90 > th dose independent rect. 4 4
83 93.20 temperature 30.0 90 < th dose independent rect. 4 4
84 93.20 humidity 50.0 90 > th dose independent rect. 4 4
86 93.20 atmosphere 995.0 90 > th dose independent rect. 4 4
87 93.20 atmosphere 1015.0 90 < th dose independent rect. 4 4
88 93.20 temperature 10.0 90 > th dose independent rect. 8 20
93 93.28 precipitation 0.1 10 < th dose independent rect. 5 4
94 93.28 precipitation 0.1 10 < th dose dependent rect. 5 4
110 93.31 wind 9.0 270 < th dose independent rect. 5 23
127 93.42 precipitation 0.1 90 < th dose independent rect. 8 20
128 93.42 precipitation 0.1 90 < th dose dependent rect. 8 20
130 93.43 radiation 40.0 270 < th dose dependent rect. 3 4
146 93.49 atmosphere 1000.0 90 > th dose dependent rect. 4 4
150 93.52 radiation 1.0 270 < th dose dependent rect. 4 1
151 93.52 temperature 10.0 270 > th dose dependent rect. 4 2
154 93.56 humidity 90.0 10 < th dose independent rect. 2 7
158 93.61 temperature 10.0 270 > th dose independent rect. 4 1
160 93.61 temperature 30.0 270 < th dose independent rect. 4 1
161 93.61 humidity 50.0 270 > th dose independent rect. 4 1
164 93.61 atmosphere 995.0 270 > th dose independent rect. 4 1
165 93.61 atmosphere 1010.0 270 < th dose independent rect. 4 1
167 93.61 radiation 20.0 270 < th dose independent rect. 4 1
182 93.61 temperature 10.0 270 > th dose independent rect. 5 23
186 93.64 radiation 40.0 270 < th dose dependent rect. 4 1
187 93.65 temperature 10.0 1440 > th dose independent rect. 5 5
190 93.65 atmosphere 995.0 1440 > th dose independent rect. 5 5
191 93.65 atmosphere 1015.0 1440 < th dose independent rect. 5 5
192 93.65 temperature 10.0 1440 > th dose independent rect. 10 19
208 93.75 atmosphere 995.0 90 > th dose independent rect. 8 20
209 93.76 radiation 1.0 270 < th dose independent rect. 4 1
275 94.04 atmosphere 1000.0 10 > th dose independent rect. 20 9
298 94.20 humidity 90.0 10 < th dose independent rect. 5 4
342 94.30 atmosphere 1000.0 270 > th dose dependent rect. 4 1
346 94.32 radiation 1.0 90 > th dose dependent rect. 18 13
349 94.35 humidity 50.0 270 > th dose dependent rect. 4 1
375 94.55 radiation 1.0 90 > th dose dependent rect. 4 3
416 94.69 temperature 10.0 90 > th dose dependent rect. 8 7
422 94.73 precipitation 0.1 270 < th dose independent rect. 3 14
423 94.73 precipitation 0.1 270 < th dose dependent rect. 3 14
430 94.80 atmosphere 1005.0 270 > th dose independent rect. 3 4
431 94.82 radiation 10.0 30 < th dose dependent sin 11 NA
441 94.89 radiation 30.0 90 < th dose independent rect. 4 7
445 94.91 temperature 10.0 10 > th dose dependent rect. 9 6
459 94.99 humidity 50.0 270 > th dose dependent rect. 3 4
465 95.04 atmosphere 1005.0 10 > th dose independent rect. 5 4
484 95.13 atmosphere 1005.0 270 > th dose independent rect. 4 2
489 95.14 atmosphere 995.0 90 > th dose dependent rect. 19 9
490 95.15 wind 7.0 270 < th dose independent rect. 17 10
508 95.20 atmosphere 995.0 10 > th dose dependent rect. 20 9
514 95.23 atmosphere 1000.0 270 > th dose independent rect. 22 14
541 95.34 wind 9.0 90 < th dose independent rect. 8 9
542 95.35 precipitation 0.1 90 < th dose independent rect. 8 7
545 95.35 precipitation 0.1 90 < th dose dependent rect. 8 7
547 95.37 radiation 1.0 90 < th dose independent sin 11 NA
555 95.38 humidity 70.0 90 > th dose independent rect. 4 7
562 95.42 wind 9.0 90 < th dose independent rect. 8 7
563 95.42 radiation 10.0 270 < th dose independent rect. 17 10
567 95.45 precipitation 0.1 270 < th dose independent rect. 17 10
568 95.45 humidity 50.0 90 > th dose independent rect. 17 15
569 95.45 precipitation 0.1 270 < th dose dependent rect. 17 10
575 95.47 temperature 10.0 270 > th dose independent rect. 17 10
579 95.47 temperature 10.0 270 > th dose independent rect. 3 14
580 95.47 atmosphere 1015.0 270 < th dose independent rect. 3 14
589 95.49 temperature 10.0 90 > th dose independent rect. 8 7
590 95.49 atmosphere 1015.0 90 < th dose independent rect. 8 7
591 95.49 radiation 40.0 10 < th dose independent rect. 5 15
592 95.49 temperature 10.0 90 > th dose independent rect. 15 17
605 95.50 humidity 50.0 30 > th dose independent rect. 9 19
610 95.53 atmosphere 1015.0 270 < th dose dependent rect. 4 1
612 95.54 precipitation 0.1 90 < th dose independent rect. 8 9
614 95.54 precipitation 0.1 90 < th dose dependent rect. 8 9
616 95.55 radiation 40.0 270 < th dose dependent rect. 17 10
618 95.57 atmosphere 995.0 90 > th dose independent rect. 8 7
621 95.58 wind 1.0 270 > th dose independent rect. 3 4
622 95.58 radiation 40.0 90 < th dose independent rect. 4 15
664 95.63 wind 9.0 10 < th dose independent rect. 9 7
671 95.64 precipitation 0.1 10 < th dose independent rect. 16 17
673 95.64 precipitation 0.1 10 < th dose dependent rect. 16 17
674 95.65 temperature 10.0 90 > th dose independent rect. 8 9
675 95.65 atmosphere 1015.0 90 < th dose independent rect. 8 9
676 95.65 temperature 10.0 90 > th dose independent rect. 17 15
705 95.75 atmosphere 1015.0 30 < th dose dependent rect. 4 5
710 95.76 wind 9.0 270 < th dose dependent rect. 7 20
732 95.78 radiation 40.0 90 < th dose independent rect. 15 17
733 95.78 precipitation 0.1 90 < th dose independent rect. 15 17
740 95.78 precipitation 0.1 90 < th dose dependent rect. 15 17
747 95.80 radiation 40.0 90 < th dose independent rect. 17 15
752 95.82 temperature 10.0 10 > th dose independent rect. 9 7
754 95.82 atmosphere 1015.0 10 < th dose independent rect. 9 7
755 95.82 precipitation 0.1 10 < th dose independent rect. 9 7
756 95.82 temperature 10.0 10 > th dose independent rect. 16 17
760 95.82 precipitation 0.1 10 < th dose dependent rect. 9 7
763 95.83 atmosphere 995.0 90 > th dose independent rect. 8 9
764 95.83 humidity 50.0 90 > th dose independent rect. 15 17
767 95.84 atmosphere 995.0 10 > th dose independent rect. 9 7
783 95.88 wind 9.0 90 < th dose independent rect. 17 15
790 95.88 wind 9.0 270 < th dose dependent rect. 7 8
800 95.90 wind 1.0 90 > th dose independent rect. 5 3
803 95.90 wind 9.0 90 < th dose independent rect. 15 17
809 95.91 radiation 1.0 10 > th dose independent rect. 9 6
811 95.92 wind 1.0 90 > th dose independent rect. 8 7
812 95.92 precipitation 0.1 90 < th dose independent rect. 17 15
815 95.92 precipitation 0.1 90 < th dose dependent rect. 17 15
824 95.94 atmosphere 1015.0 30 < th dose independent rect. 9 19
851 95.97 wind 9.0 1440 < th dose independent rect. 5 4
855 95.97 humidity 50.0 1440 > th dose independent rect. 5 4
876 95.99 atmosphere 1000.0 270 > th dose independent rect. 23 2
889 96.02 radiation 1.0 90 > th dose independent rect. 8 7
905 96.06 radiation 1.0 90 > th dose independent sin 11 NA
908 96.06 humidity 60.0 10 > th dose independent rect. 17 16
940 96.11 atmosphere 995.0 90 > th dose independent rect. 17 15
954 96.12 humidity 50.0 270 > th dose independent rect. 18 9
963 96.12 wind 9.0 10 < th dose independent rect. 16 17
989 96.18 temperature 10.0 1440 > th dose independent rect. 10 6
992 96.18 temperature 10.0 1440 > th dose independent rect. 16 18