Os02g0821100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0821100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.41 | 0.405 | 3.26 | -0.00391 | 0.108 | 2.47 | 0.373 | -5.06 | 0.00861 | 9.56 | 0.01368 | 282 | -- | -- |
| 75.56 | 0.405 | 3.23 | 0.0663 | 0.0933 | 1.05 | 0.352 | -- | -0.0178 | 9.67 | 0.5 | 164 | -- | -- |
| 74.92 | 0.403 | 3.26 | 0.00909 | 0.113 | 2.45 | -- | -5.15 | 0.0089 | 9.68 | 0.0006767 | 282 | -- | -- |
| 75.47 | 0.405 | 3.23 | 0.0752 | 0.114 | 0.939 | -- | -- | -0.00168 | 9.96 | 0.3012 | 282 | -- | -- |
| 75.56 | 0.405 | 3.26 | 0.0143 | -- | 2.44 | -- | -5.35 | 0.00793 | -- | 1.393e-05 | 282 | -- | -- |
| 78.26 | 0.415 | 3.24 | 0.124 | 0.0926 | -- | 0.178 | -- | -0.015 | 9.8 | -- | -- | -- | -- |
| 78.39 | 0.415 | 3.24 | 0.13 | 0.0919 | -- | -- | -- | -0.0146 | 9.78 | -- | -- | -- | -- |
| 76.27 | 0.407 | 3.24 | 0.0674 | -- | 0.892 | -- | -- | -0.00104 | -- | 0.3033 | 282 | -- | -- |
| 75.57 | 0.405 | 3.24 | -- | 0.117 | 0.983 | -- | -- | -0.00676 | 9.7 | 0.3288 | 282 | -- | -- |
| 78.89 | 0.415 | 3.24 | 0.129 | -- | -- | -- | -- | -0.0146 | -- | -- | -- | -- | -- |
| 78.83 | 0.415 | 3.24 | -- | 0.0915 | -- | -- | -- | -0.0292 | 9.67 | -- | -- | -- | -- |
| 76.38 | 0.407 | 3.24 | -- | -- | 0.929 | -- | -- | -0.00769 | -- | 0.369 | 282 | -- | -- |
| 79.33 | 0.416 | 3.24 | -- | -- | -- | -- | -- | -0.0289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.00 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 4 | 69.61 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 9 | 4 |
| 9 | 70.05 | temperature | 25.0 | 10 | > th | dose independent | rect. | 22 | 1 |
| 10 | 70.10 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 15 | 70.19 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 16 | 70.20 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 17 | 70.20 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 18 | 70.20 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 20 | 70.22 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 21 | 70.23 | wind | 3.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 23 | 70.24 | wind | 7.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 25 | 70.24 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 27 | 70.24 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 28 | 70.24 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 31 | 70.24 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 32 | 70.24 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 34 | 70.24 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 39 | 70.24 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 41 | 70.24 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 43 | 70.24 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 49 | 70.25 | wind | 9.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 56 | 70.32 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 57 | 70.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 60 | 70.32 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 64 | 70.32 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 74 | 70.32 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 75 | 70.32 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 95 | 70.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 98 | 70.32 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 103 | 70.35 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 104 | 70.38 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 114 | 70.42 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 115 | 70.42 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 116 | 70.42 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 130 | 70.48 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 140 | 70.54 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 142 | 70.55 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 24 | 13 |
| 158 | 70.71 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 8 | 9 |
| 163 | 70.77 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 177 | 70.81 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 181 | 70.84 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 7 | 6 |
| 197 | 71.11 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 267 | 71.20 | wind | 7.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 270 | 71.24 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 275 | 71.32 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 361 | 72.05 | wind | 3.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 366 | 72.11 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 9 |
| 369 | 72.17 | wind | 3.0 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 385 | 72.37 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 391 | 72.41 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 19 | 18 |
| 425 | 72.60 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 428 | 72.62 | precipitation | 0.1 | 270 | > th | dose independent | sin | 10 | NA |
| 430 | 72.63 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 12 |
| 437 | 72.65 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 14 |
| 441 | 72.67 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 9 | NA |
| 480 | 72.92 | wind | 7.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 488 | 72.97 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 498 | 72.99 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 504 | 73.00 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 9 |
| 519 | 73.06 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 522 | 73.07 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 23 |
| 525 | 73.07 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 526 | 73.08 | wind | 3.0 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 531 | 73.11 | wind | 3.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 535 | 73.13 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 562 | 73.23 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 569 | 73.24 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 17 |
| 573 | 73.26 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 574 | 73.26 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 575 | 73.26 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 16 |
| 576 | 73.27 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 587 | 73.29 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 10 | 2 |
| 594 | 73.29 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 16 | 9 |
| 606 | 73.31 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 7 | 8 |
| 608 | 73.32 | wind | 5.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 609 | 73.32 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 614 | 73.33 | precipitation | 0.1 | 270 | < th | dose independent | sin | 10 | NA |
| 617 | 73.33 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 620 | 73.33 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 10 | NA |
| 625 | 73.34 | wind | 5.0 | 14400 | > th | dose independent | sin | 1 | NA |
| 627 | 73.34 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 17 |
| 630 | 73.34 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 16 |
| 647 | 73.36 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 20 |
| 673 | 73.38 | wind | 5.0 | 14400 | < th | dose independent | rect. | 22 | 19 |
| 686 | 73.39 | wind | 5.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 692 | 73.39 | wind | 5.0 | 14400 | < th | dose independent | rect. | 24 | 20 |
| 711 | 73.40 | wind | 3.0 | 43200 | > th | dose dependent | sin | 16 | NA |
| 712 | 73.40 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 713 | 73.40 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 8 | 7 |
| 722 | 73.40 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 18 | 22 |
| 726 | 73.41 | wind | 5.0 | 43200 | < th | dose independent | rect. | 12 | 15 |
| 728 | 73.41 | wind | 5.0 | 14400 | > th | dose independent | rect. | 22 | 19 |
| 735 | 73.41 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 16 | 12 |
| 742 | 73.42 | wind | 3.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 745 | 73.42 | wind | 5.0 | 43200 | < th | dose independent | rect. | 15 | 11 |
| 748 | 73.42 | wind | 5.0 | 14400 | > th | dose independent | rect. | 24 | 20 |
| 803 | 73.44 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 12 | 15 |
| 811 | 73.45 | wind | 5.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 812 | 73.45 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 3 | 4 |
| 820 | 73.45 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 20 |
| 823 | 73.45 | wind | 5.0 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 846 | 73.46 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 19 |
| 852 | 73.46 | wind | 3.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 889 | 73.47 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 21 | 20 |
| 908 | 73.48 | wind | 5.0 | 14400 | > th | dose independent | rect. | 19 | 22 |
| 928 | 73.49 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 974 | 73.50 | wind | 5.0 | 43200 | > th | dose independent | rect. | 12 | 13 |
| 983 | 73.50 | wind | 5.0 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 988 | 73.50 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 996 | 73.50 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 19 | 14 |