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Os02g0820700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Bet1-like SNARE 1-1 (AtBET11) (Bet1/Sft1-like SNARE 14a) (AtBS14a).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0108) R2 : 0.0961
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.159 (0.0228) R2dN8 : 0.124 R2N8 : 0.0961
σ : 0.204
deviance : 19.14
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.28 0.165 12.7 0.209 0.224 -0.105 -0.643 -0.844 0.173 19.9 999.5 4087 -- --
12.79 0.167 12.7 0.229 0.219 -0.202 -0.64 -- 0.164 19.8 999.1 4845 -- --
13.44 0.171 12.7 0.227 0.227 -0.117 -- -0.818 0.173 19.4 999.5 4026 -- --
13.79 0.173 12.7 0.271 0.234 -0.248 -- -- 0.171 19.1 999.2 10453 -- --
16.22 0.188 12.7 0.225 -- -0.107 -- -0.806 0.169 -- 999.5 4242 -- --
13.93 0.175 12.7 0.206 0.222 -- -0.646 -- 0.187 19.9 -- -- -- --
15.09 0.182 12.7 0.225 0.228 -- -- -- 0.187 19.4 -- -- -- --
16.54 0.189 12.7 0.265 -- -0.261 -- -- 0.166 -- 998.8 9800 -- --
15.59 0.184 12.7 -- 0.226 -0.227 -- -- 0.14 19.3 999.3 9668 -- --
17.85 0.197 12.7 0.221 -- -- -- -- 0.183 -- -- -- -- --
16.42 0.19 12.7 -- 0.225 -- -- -- 0.162 19.4 -- -- -- --
18.3 0.199 12.7 -- -- -0.213 -- -- 0.139 -- 998.9 9680 -- --
19.14 0.204 12.7 -- -- -- -- -- 0.159 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 10.53 temperature 25.0 90 > th dose independent rect. 5 6
2 10.66 temperature 25.0 270 > th dose independent rect. 5 3
3 10.75 temperature 25.0 270 > th dose dependent rect. 5 3
10 10.84 temperature 15.0 270 > th dose dependent rect. 4 6
11 10.88 temperature 20.0 90 > th dose dependent rect. 6 5
14 10.89 temperature 30.0 10 < th dose dependent rect. 1 16
28 11.00 temperature 30.0 10 < th dose dependent rect. 1 14
29 11.01 temperature 25.0 90 > th dose independent rect. 1 10
33 11.02 temperature 25.0 90 < th dose independent rect. 1 14
54 11.08 temperature 25.0 10 > th dose dependent sin 8 NA
65 11.12 temperature 20.0 10 > th dose dependent rect. 6 5
96 11.21 temperature 30.0 10 < th dose dependent rect. 24 23
99 11.22 temperature 30.0 10 < th dose dependent rect. 1 11
101 11.23 temperature 25.0 90 > th dose independent sin 5 NA
103 11.23 temperature 25.0 90 < th dose independent rect. 24 19
113 11.25 temperature 10.0 10 > th dose dependent rect. 6 19
114 11.25 temperature 30.0 10 < th dose dependent rect. 1 20
139 11.32 temperature 25.0 90 < th dose independent rect. 24 21
152 11.35 temperature 15.0 10 > th dose dependent rect. 6 7
193 11.42 temperature 25.0 90 < th dose independent sin 5 NA
204 11.44 temperature 10.0 10 > th dose dependent rect. 6 21
224 11.48 temperature 30.0 10 < th dose dependent sin 3 NA
231 11.49 wind 9.0 90 < th dose dependent rect. 6 18
251 11.52 temperature 25.0 10 > th dose dependent rect. 23 12
285 11.56 temperature 15.0 90 > th dose independent rect. 6 18
297 11.58 wind 5.0 90 < th dose independent rect. 6 18
299 11.58 wind 7.0 90 < th dose dependent rect. 6 7
311 11.60 temperature 25.0 90 < th dose independent rect. 1 8
323 11.61 wind 9.0 10 < th dose dependent rect. 6 19
329 11.62 temperature 15.0 10 > th dose dependent sin 4 NA
339 11.63 wind 5.0 10 < th dose independent rect. 6 19
343 11.63 wind 7.0 90 < th dose dependent rect. 6 5
365 11.66 precipitation 0.1 14400 > th dose independent rect. 17 1
380 11.67 atmosphere 1010.0 30 < th dose independent rect. 6 19
401 11.69 wind 5.0 90 < th dose independent rect. 6 5
419 11.70 temperature 30.0 90 < th dose dependent rect. 1 5
439 11.71 temperature 15.0 10 > th dose dependent rect. 6 10
447 11.72 atmosphere 1010.0 30 < th dose independent rect. 6 7
487 11.75 atmosphere 1015.0 1440 < th dose independent rect. 2 5
506 11.76 atmosphere 1010.0 90 < th dose independent rect. 6 5
511 11.76 temperature 30.0 270 < th dose dependent rect. 1 3
529 11.77 wind 5.0 10 < th dose independent rect. 6 7
532 11.77 radiation 40.0 270 < th dose independent rect. 13 11
582 11.80 temperature 15.0 270 > th dose independent rect. 4 20
585 11.80 precipitation 0.1 14400 > th dose dependent rect. 17 1
594 11.80 temperature 10.0 10 > th dose dependent rect. 6 14
601 11.81 temperature 15.0 270 > th dose independent rect. 3 22
634 11.83 wind 5.0 10 < th dose independent rect. 6 21
655 11.84 atmosphere 995.0 30 > th dose independent rect. 6 19
667 11.85 precipitation 0.1 14400 < th dose independent rect. 17 1
668 11.85 precipitation 0.1 30 < th dose independent rect. 1 5
675 11.85 precipitation 0.1 14400 < th dose dependent rect. 17 1
676 11.85 precipitation 0.1 30 < th dose dependent rect. 1 5
688 11.86 wind 7.0 30 < th dose independent rect. 1 5
690 11.86 wind 9.0 1440 < th dose independent rect. 2 5
691 11.86 temperature 10.0 30 > th dose independent rect. 1 5
693 11.86 temperature 10.0 1440 > th dose independent rect. 2 5
697 11.86 temperature 30.0 1440 < th dose independent rect. 2 5
701 11.86 humidity 50.0 30 > th dose independent rect. 1 5
704 11.86 humidity 50.0 1440 > th dose independent rect. 2 5
709 11.86 atmosphere 995.0 30 > th dose independent rect. 1 5
710 11.86 atmosphere 995.0 1440 > th dose independent rect. 2 5
711 11.86 atmosphere 1010.0 30 < th dose independent rect. 1 5
713 11.86 radiation 20.0 30 < th dose independent rect. 1 5
716 11.86 radiation 40.0 1440 < th dose independent rect. 2 5
723 11.86 temperature 10.0 1440 > th dose independent rect. 7 19
727 11.86 precipitation 0.1 30 < th dose independent rect. 6 19
736 11.86 precipitation 0.1 30 < th dose dependent rect. 6 19
796 11.89 radiation 1.0 270 > th dose independent sin 9 NA
803 11.89 radiation 40.0 30 < th dose dependent rect. 1 5
816 11.90 precipitation 0.1 90 < th dose independent rect. 6 5
826 11.90 atmosphere 1015.0 90 < th dose independent rect. 11 19
833 11.90 precipitation 0.1 90 < th dose dependent rect. 6 5
843 11.91 atmosphere 995.0 90 > th dose independent rect. 6 5
870 11.91 temperature 10.0 90 > th dose independent rect. 11 19
882 11.91 wind 7.0 90 < th dose dependent rect. 6 13
889 11.92 wind 5.0 270 < th dose independent rect. 6 3
891 11.92 radiation 1.0 90 > th dose independent rect. 6 5
903 11.92 temperature 15.0 90 > th dose independent rect. 6 21
905 11.92 wind 7.0 270 < th dose dependent rect. 6 3
972 11.94 wind 5.0 10 < th dose independent rect. 6 11
976 11.94 wind 9.0 90 < th dose independent rect. 11 19
985 11.94 radiation 1.0 270 < th dose dependent sin 9 NA
987 11.94 humidity 50.0 30 > th dose dependent rect. 1 5