Os02g0820400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os02g0820400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.83 | 0.372 | 9.8 | 0.81 | 1.82 | -0.692 | -0.697 | -0.245 | 0.188 | 12.9 | 74.8 | 1332 | -- | -- |
| 62.95 | 0.37 | 9.8 | 0.776 | 1.81 | -0.699 | -0.718 | -- | 0.178 | 12.9 | 74.65 | 1345 | -- | -- |
| 64.84 | 0.375 | 9.8 | 0.799 | 1.84 | -0.705 | -- | -0.367 | 0.187 | 12.9 | 74.74 | 1323 | -- | -- |
| 65.1 | 0.376 | 9.81 | 0.747 | 1.81 | -0.715 | -- | -- | 0.171 | 12.9 | 74.65 | 1350 | -- | -- |
| 147.26 | 0.565 | 9.82 | 0.706 | -- | -1.06 | -- | 0.891 | 0.271 | -- | 77.05 | 9 | -- | -- |
| 78.16 | 0.414 | 9.78 | 0.884 | 1.74 | -- | -0.83 | -- | 0.273 | 12.9 | -- | -- | -- | -- |
| 81.07 | 0.422 | 9.78 | 0.854 | 1.74 | -- | -- | -- | 0.268 | 12.8 | -- | -- | -- | -- |
| 149.29 | 0.569 | 9.81 | 0.69 | -- | -1.05 | -- | -- | 0.259 | -- | 77.33 | 6 | -- | -- |
| 79.15 | 0.414 | 9.83 | -- | 1.82 | -0.765 | -- | -- | 0.0824 | 12.9 | 73.19 | 1330 | -- | -- |
| 270.37 | 0.768 | 9.81 | 0.79 | -- | -- | -- | -- | 0.236 | -- | -- | -- | -- | -- |
| 100.28 | 0.468 | 9.81 | -- | 1.73 | -- | -- | -- | 0.173 | 12.8 | -- | -- | -- | -- |
| 161.92 | 0.593 | 9.83 | -- | -- | -1.07 | -- | -- | 0.18 | -- | 77.81 | 9 | -- | -- |
| 286.82 | 0.79 | 9.83 | -- | -- | -- | -- | -- | 0.148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.35 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 2 | 60.49 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 3 | 60.53 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 4 | 60.62 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 5 | 60.87 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 6 | 60.87 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 17 |
| 8 | 60.92 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 10 | 60.92 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 15 | 61.05 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 14 |
| 16 | 61.06 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 28 | 61.12 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 29 | 61.12 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 35 | 61.21 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 50 | 61.25 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 53 | 61.27 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 80 | 61.47 | humidity | 60.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 82 | 61.49 | humidity | 60.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 89 | 61.56 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 147 | 61.98 | humidity | 80.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 170 | 62.07 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 199 | 62.25 | humidity | 80.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 225 | 62.41 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 251 | 62.61 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 305 | 62.84 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 318 | 62.88 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 331 | 62.91 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 332 | 62.91 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 389 | 63.03 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 392 | 63.03 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 414 | 63.09 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 439 | 63.17 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 469 | 63.21 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 487 | 63.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 491 | 63.23 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 511 | 63.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 513 | 63.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 545 | 63.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 720 | 63.57 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 732 | 63.59 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 1 | NA |
| 735 | 63.60 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 740 | 63.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 6 |
| 745 | 63.62 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 746 | 63.62 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 763 | 63.65 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 814 | 63.71 | humidity | 60.0 | 14400 | < th | dose independent | no | NA | NA |
| 823 | 63.71 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 14 |
| 903 | 63.72 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 9 |