Os02g0819500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ovarian tumour, otubain domain containing protein.
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Os02g0819500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ovarian tumour, otubain domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.16 | 0.279 | 11.7 | -0.278 | 0.671 | -1.33 | -0.332 | 0.87 | -0.00498 | 4.47 | 22.27 | 267 | -- | -- |
| 35.78 | 0.279 | 11.7 | -0.386 | 0.713 | -1.24 | -0.307 | -- | -0.0409 | 4.4 | 22.32 | 269 | -- | -- |
| 35.3 | 0.277 | 11.6 | -0.227 | 0.685 | -1.33 | -- | 1.22 | 0.0116 | 4.66 | 22.3 | 243 | -- | -- |
| 36.21 | 0.28 | 11.7 | -0.44 | 0.697 | -1.24 | -- | -- | -0.0535 | 4.66 | 22.23 | 249 | -- | -- |
| 48.54 | 0.325 | 11.6 | 0.0817 | -- | -2.01 | -- | 2.99 | 0.0845 | -- | 24.08 | 243 | -- | -- |
| 63.26 | 0.373 | 11.7 | -0.701 | 1.22 | -- | -0.0646 | -- | -0.249 | 4.67 | -- | -- | -- | -- |
| 63.27 | 0.373 | 11.7 | -0.701 | 1.22 | -- | -- | -- | -0.248 | 4.68 | -- | -- | -- | -- |
| 51.09 | 0.333 | 11.7 | -0.354 | -- | -1.79 | -- | -- | -0.0269 | -- | 23.97 | 250 | -- | -- |
| 40.86 | 0.298 | 11.7 | -- | 0.647 | -1.36 | -- | -- | 0.0218 | 4.72 | 21.74 | 248 | -- | -- |
| 141.82 | 0.556 | 11.7 | -0.654 | -- | -- | -- | -- | -0.217 | -- | -- | -- | -- | -- |
| 76.21 | 0.408 | 11.7 | -- | 1.2 | -- | -- | -- | -0.17 | 4.7 | -- | -- | -- | -- |
| 54.14 | 0.343 | 11.7 | -- | -- | -1.85 | -- | -- | 0.0388 | -- | 23.57 | 249 | -- | -- |
| 153.11 | 0.578 | 11.7 | -- | -- | -- | -- | -- | -0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.64 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 4 | 33.66 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 13 | 34.14 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 17 |
| 28 | 34.74 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 43 | 35.09 | temperature | 10 | 90 | > th | dose dependent | sin | 21 | NA |
| 54 | 35.32 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 64 | 35.44 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 66 | 35.51 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 72 | 35.62 | temperature | 10 | 270 | > th | dose dependent | sin | 23 | NA |
| 105 | 36.05 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 159 | 36.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 17 |
| 256 | 37.41 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 258 | 37.44 | temperature | 30 | 270 | < th | dose independent | rect. | 4 | 16 |
| 324 | 37.75 | temperature | 30 | 270 | < th | dose dependent | sin | 23 | NA |
| 482 | 38.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 626 | 38.89 | temperature | 30 | 270 | < th | dose independent | rect. | 1 | 22 |
| 653 | 38.98 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 20 |
| 656 | 38.99 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 14 |
| 705 | 39.13 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 22 |