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Os02g0819100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, DHHC-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.47 (0.0202) R2 : 0.00671
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0747 (0.0426) R2dN8 : 0.00866 R2N8 : 0.00671
σ : 0.381
deviance : 66.55
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
47.33 0.323 7.46 0.163 0.505 0.331 -0.145 -2.08 0.104 0.945 79 859 -- --
53.03 0.342 7.47 0.0318 0.0487 0.303 0.824 -- 0.0699 20.7 81.49 813 -- --
47.4 0.321 7.46 0.161 0.504 0.329 -- -1.98 0.103 0.888 78.81 849 -- --
53.46 0.343 7.47 0.0177 0.212 0.22 -- -- 0.0807 2.18 73 9 -- --
55.22 0.346 7.48 -0.0636 -- 0.363 -- -0.246 0.103 -- 85 67 -- --
55.57 0.349 7.47 0.00215 0.416 -- 0.329 -- 0.0682 1.73 -- -- -- --
55.92 0.35 7.47 -0.00898 0.421 -- -- -- 0.0657 2.08 -- -- -- --
54.22 0.343 7.47 0.0409 -- 0.359 -- -- 0.0744 -- 72.87 18 -- --
52.81 0.34 7.47 -- 0.22 0.244 -- -- 0.051 2.07 71.84 11 -- --
66.55 0.381 7.47 0.00858 -- -- -- -- 0.0757 -- -- -- -- --
55.92 0.35 7.47 -- 0.421 -- -- -- 0.0667 2.08 -- -- -- --
54.26 0.343 7.47 -- -- 0.358 -- -- 0.0699 -- 72.79 18 -- --
66.55 0.381 7.47 -- -- -- -- -- 0.0747 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.02 temperature 30 90 < th dose dependent rect. 15 18
72 45.42 radiation 10 1440 > th dose independent rect. 11 1
81 45.62 radiation 1 1440 > th dose independent rect. 8 5
88 45.85 radiation 10 720 < th dose dependent sin 21 NA
94 46.07 radiation 1 1440 < th dose independent rect. 10 2
95 46.07 radiation 1 1440 < th dose dependent rect. 10 2
106 46.22 radiation 10 1440 < th dose dependent rect. 9 8
121 46.42 radiation 1 1440 < th dose independent rect. 8 5
122 46.42 radiation 1 1440 < th dose dependent rect. 8 5
131 46.50 radiation 10 720 < th dose dependent rect. 8 14
140 46.58 radiation 10 720 < th dose dependent rect. 9 12
151 46.72 radiation 1 720 < th dose independent sin 21 NA
161 46.83 radiation 1 720 < th dose independent rect. 8 13
163 46.85 radiation 1 720 > th dose independent sin 19 NA
235 47.11 temperature 30 90 < th dose dependent sin 9 NA
244 47.13 temperature 20 270 > th dose independent rect. 21 14
262 47.16 radiation 1 720 > th dose independent rect. 9 20
272 47.18 radiation 1 720 > th dose independent rect. 9 10
282 47.18 radiation 1 720 > th dose independent rect. 11 18
288 47.20 radiation 1 720 > th dose independent rect. 11 8
312 47.22 humidity 80 270 > th dose dependent rect. 19 19
352 47.28 humidity 90 720 < th dose dependent rect. 8 16
371 47.32 temperature 25 90 < th dose independent rect. 15 18
386 47.34 temperature 25 90 < th dose dependent rect. 1 22
392 47.36 temperature 25 90 < th dose independent rect. 13 20
400 47.38 temperature 10 90 > th dose dependent sin 7 NA
403 47.38 humidity 50 720 > th dose dependent rect. 10 16
416 47.39 temperature 20 270 > th dose independent rect. 21 16
427 47.39 humidity 80 270 > th dose dependent rect. 8 22
447 47.42 humidity 80 720 < th dose independent rect. 9 10
478 47.44 humidity 50 720 > th dose dependent rect. 9 22
509 47.47 humidity 80 720 < th dose independent rect. 23 20
595 47.54 humidity 80 720 > th dose independent rect. 23 20
606 47.55 humidity 90 720 < th dose dependent sin 21 NA
611 47.55 humidity 90 720 < th dose dependent rect. 17 23
633 47.57 humidity 50 720 > th dose dependent sin 17 NA
655 47.59 radiation 1 720 > th dose independent rect. 13 16
693 47.61 radiation 1 720 > th dose independent rect. 13 6
727 47.62 humidity 90 720 < th dose dependent rect. 23 23
736 47.63 humidity 90 720 < th dose dependent no NA NA
757 47.64 radiation 30 720 < th dose dependent rect. 1 23
775 47.66 humidity 90 720 < th dose dependent rect. 15 23
789 47.68 humidity 80 720 < th dose independent sin 23 NA
830 47.68 humidity 50 720 > th dose dependent rect. 18 23
832 47.69 radiation 1 1440 < th dose independent rect. 13 1
834 47.69 humidity 90 270 > th dose independent rect. 20 15
835 47.69 radiation 1 1440 < th dose dependent rect. 13 1
839 47.69 temperature 25 10 < th dose dependent rect. 1 23
843 47.70 radiation 40 1440 < th dose independent rect. 16 16
886 47.72 radiation 30 720 < th dose dependent rect. 3 23
887 47.73 radiation 1 1440 > th dose independent rect. 13 1
895 47.73 humidity 90 720 < th dose dependent rect. 13 23
907 47.75 radiation 20 720 < th dose dependent rect. 23 18
910 47.75 radiation 40 720 < th dose dependent rect. 18 23
923 47.76 humidity 90 720 > th dose dependent rect. 20 3
948 47.78 humidity 90 270 > th dose independent rect. 20 18
957 47.78 radiation 30 720 < th dose dependent rect. 23 23