Os02g0817900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os02g0817900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 186.29 | 0.641 | 11.3 | -0.672 | 0.588 | 1.63 | -2.11 | -1.49 | -1.05 | 19.3 | 80 | 1483 | 7.83 | 5.92 |
| 189.24 | 0.641 | 11.3 | -0.484 | 0.574 | 1.55 | -2.09 | -- | -1.03 | 19.2 | 79 | 1479 | 7.93 | 6.32 |
| 193.77 | 0.648 | 11.3 | -0.597 | 0.711 | 1.84 | -- | -1.58 | -1 | 21.2 | 79.76 | 1543 | 7.82 | 5.71 |
| 196.3 | 0.653 | 11.3 | -0.451 | 0.694 | 1.73 | -- | -- | -0.985 | 21.2 | 79.62 | 1544 | 7.86 | 6.03 |
| 215.38 | 0.684 | 11.3 | -0.619 | -- | 1.52 | -- | -1.19 | -1.05 | -- | 79 | 1456 | 7.85 | 5.99 |
| 241.59 | 0.729 | 11.2 | -0.232 | 0.521 | -- | -2.37 | -- | -0.736 | 18.5 | -- | -- | -- | -- |
| 253.34 | 0.745 | 11.2 | -0.206 | 0.54 | -- | -- | -- | -0.746 | 19.9 | -- | -- | -- | -- |
| 217.22 | 0.686 | 11.3 | -0.463 | -- | 1.45 | -- | -- | -1.04 | -- | 79.67 | 1453 | 7.93 | 6.3 |
| 201.31 | 0.661 | 11.3 | -- | 0.692 | 1.67 | -- | -- | -0.962 | 21.2 | 79.82 | 1546 | 8.09 | 5.76 |
| 269.18 | 0.767 | 11.2 | -0.212 | -- | -- | -- | -- | -0.754 | -- | -- | -- | -- | -- |
| 254.45 | 0.746 | 11.2 | -- | 0.542 | -- | -- | -- | -0.723 | 19.8 | -- | -- | -- | -- |
| 222.29 | 0.694 | 11.3 | -- | -- | 1.38 | -- | -- | -0.988 | -- | 79.77 | 1453 | 8.11 | 6.13 |
| 270.36 | 0.767 | 11.2 | -- | -- | -- | -- | -- | -0.73 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 188.60 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 6 | 191.47 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 50 | 196.44 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 7 |
| 57 | 196.73 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 70 | 197.19 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 92 | 197.63 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 106 | 197.82 | humidity | 70 | 1440 | > th | dose independent | rect. | 20 | 17 |
| 108 | 197.84 | humidity | 70 | 1440 | > th | dose independent | rect. | 22 | 15 |
| 156 | 198.63 | humidity | 70 | 1440 | > th | dose independent | sin | 7 | NA |
| 163 | 198.74 | humidity | 80 | 1440 | < th | dose dependent | sin | 6 | NA |
| 182 | 199.00 | humidity | 60 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 237 | 200.24 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 302 | 201.06 | humidity | 70 | 1440 | < th | dose independent | sin | 7 | NA |
| 342 | 201.47 | radiation | 20 | 90 | < th | dose dependent | sin | 2 | NA |
| 485 | 203.78 | humidity | 60 | 10 | > th | dose dependent | sin | 2 | NA |
| 500 | 203.97 | radiation | 20 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 504 | 204.04 | radiation | 10 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 601 | 204.98 | radiation | 20 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 609 | 205.03 | radiation | 20 | 30 | < th | dose independent | rect. | 3 | 12 |
| 614 | 205.10 | wind | 1 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 632 | 205.21 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 658 | 205.52 | radiation | 20 | 30 | < th | dose independent | rect. | 1 | 14 |
| 666 | 205.61 | humidity | 60 | 30 | > th | dose dependent | rect. | 3 | 15 |
| 686 | 205.78 | humidity | 60 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 706 | 205.94 | radiation | 20 | 720 | < th | dose dependent | rect. | 14 | 17 |
| 714 | 206.04 | humidity | 70 | 30 | > th | dose independent | rect. | 3 | 15 |
| 720 | 206.12 | wind | 1 | 270 | > th | dose independent | rect. | 4 | 1 |
| 725 | 206.13 | humidity | 60 | 30 | > th | dose dependent | rect. | 1 | 14 |
| 743 | 206.28 | radiation | 20 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 768 | 206.50 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 23 |
| 777 | 206.57 | humidity | 50 | 1440 | > th | dose dependent | sin | 2 | NA |
| 809 | 206.89 | humidity | 80 | 10 | > th | dose independent | rect. | 3 | 13 |
| 816 | 206.94 | humidity | 80 | 90 | > th | dose independent | rect. | 1 | 14 |
| 841 | 207.08 | radiation | 20 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 896 | 207.42 | radiation | 30 | 10 | < th | dose dependent | rect. | 3 | 12 |
| 916 | 207.48 | humidity | 80 | 10 | > th | dose independent | sin | 1 | NA |
| 944 | 207.64 | humidity | 60 | 10 | > th | dose dependent | rect. | 3 | 13 |
| 946 | 207.65 | humidity | 70 | 30 | > th | dose independent | rect. | 1 | 17 |
| 951 | 207.70 | humidity | 80 | 10 | > th | dose independent | rect. | 1 | 14 |
| 962 | 207.74 | radiation | 10 | 720 | < th | dose dependent | sin | 14 | NA |