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Os02g0817800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Telomere binding protein-1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.018) R2 : 0.00179
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0343 (0.0379) R2dN8 : 0.00231 R2N8 : 0.00179
σ : 0.339
deviance : 52.75
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.67 0.252 10.2 -0.429 0.284 -0.428 -0.182 -0.0567 -0.0776 18.1 18.78 10 -- --
28.68 0.249 10.2 -0.428 0.286 -0.436 -0.189 -- -0.0777 18.3 18.53 10 -- --
28.75 0.25 10.2 -0.426 0.284 -0.429 -- -0.0698 -0.0779 18.2 18.8 10 -- --
28.78 0.25 10.2 -0.425 0.284 -0.432 -- -- -0.0783 18.2 18.77 10 -- --
30.84 0.259 10.2 -0.414 -- -0.402 -- 0.0548 -0.0994 -- 8.81 152 -- --
32.01 0.265 10.2 -0.413 0.514 -- 0.0373 -- -0.0703 14.2 -- -- -- --
32.02 0.265 10.2 -0.412 0.514 -- -- -- -0.0701 14.2 -- -- -- --
30.65 0.258 10.2 -0.425 -- -0.435 -- -- -0.0893 -- 7.595 166 -- --
33.53 0.27 10.2 -- 0.29 -0.409 -- -- -0.032 17.8 18.44 10 -- --
47.78 0.323 10.2 -0.434 -- -- -- -- -0.0824 -- -- -- -- --
36.5 0.283 10.2 -- 0.522 -- -- -- -0.0242 14.2 -- -- -- --
35.34 0.277 10.2 -- -- -0.441 -- -- -0.0418 -- 9.461 161 -- --
52.75 0.339 10.2 -- -- -- -- -- -0.0343 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.58 temperature 30.0 270 < th dose dependent rect. 1 4
6 20.24 temperature 30.0 10 < th dose dependent rect. 2 5
8 20.45 temperature 30.0 270 < th dose dependent rect. 2 1
15 21.09 wind 1.0 270 > th dose independent rect. 24 5
35 22.09 atmosphere 995.0 270 > th dose dependent rect. 1 3
37 22.13 atmosphere 995.0 270 > th dose dependent rect. 24 5
42 22.23 radiation 1.0 270 < th dose dependent rect. 24 12
48 22.29 radiation 1.0 270 < th dose dependent rect. 24 6
50 22.31 radiation 1.0 270 < th dose independent rect. 24 6
51 22.32 wind 7.0 270 < th dose independent rect. 1 3
56 22.36 wind 9.0 270 < th dose independent rect. 4 21
57 22.37 atmosphere 1000.0 270 > th dose independent rect. 1 4
60 22.38 precipitation 0.1 270 < th dose independent rect. 1 3
61 22.38 precipitation 0.1 270 < th dose dependent rect. 1 3
62 22.38 radiation 1.0 270 < th dose dependent rect. 1 4
70 22.43 radiation 1.0 270 < th dose independent rect. 24 13
71 22.43 precipitation 0.1 270 < th dose independent rect. 4 21
72 22.43 precipitation 0.1 270 < th dose dependent rect. 4 21
76 22.45 temperature 10.0 270 > th dose independent rect. 1 3
78 22.45 temperature 30.0 270 < th dose independent rect. 1 3
79 22.45 humidity 50.0 270 > th dose independent rect. 1 3
83 22.45 atmosphere 1010.0 270 < th dose independent rect. 1 3
85 22.45 radiation 1.0 270 < th dose independent rect. 1 3
92 22.45 temperature 10.0 270 > th dose independent rect. 4 21
159 22.53 humidity 50.0 270 > th dose independent rect. 5 19
165 22.56 wind 5.0 10 < th dose independent rect. 2 5
167 22.56 radiation 1.0 270 < th dose dependent sin 6 NA
219 22.78 wind 9.0 10 < th dose independent rect. 7 19
227 22.82 precipitation 0.1 10 < th dose independent rect. 2 5
229 22.82 precipitation 0.1 10 < th dose dependent rect. 2 5
231 22.83 atmosphere 995.0 10 > th dose dependent rect. 2 5
235 22.84 temperature 10.0 10 > th dose independent rect. 2 5
237 22.84 temperature 30.0 10 < th dose independent rect. 2 5
238 22.84 humidity 50.0 10 > th dose independent rect. 2 5
241 22.84 atmosphere 995.0 10 > th dose independent rect. 2 5
242 22.84 atmosphere 1015.0 10 < th dose independent rect. 2 5
243 22.84 radiation 20.0 10 < th dose independent rect. 2 5
246 22.84 wind 1.0 270 > th dose independent rect. 11 18
248 22.84 temperature 10.0 10 > th dose independent rect. 7 19
249 22.85 temperature 25.0 270 < th dose independent rect. 2 1
252 22.85 radiation 40.0 10 < th dose dependent rect. 2 5
270 22.86 precipitation 0.1 10 < th dose independent rect. 7 19
280 22.86 precipitation 0.1 10 < th dose dependent rect. 7 19
334 22.95 wind 7.0 10 < th dose independent rect. 7 5
367 23.02 temperature 15.0 10 > th dose independent rect. 12 19
369 23.04 radiation 1.0 270 < th dose independent sin 7 NA
407 23.12 radiation 1.0 10 > th dose independent rect. 7 5
409 23.12 wind 7.0 270 < th dose independent rect. 20 14
416 23.14 temperature 15.0 90 > th dose independent rect. 6 6
419 23.15 temperature 20.0 10 > th dose independent rect. 7 5
423 23.16 radiation 1.0 270 > th dose independent sin 7 NA
435 23.18 wind 9.0 1440 < th dose independent rect. 3 5
436 23.18 temperature 10.0 1440 > th dose independent rect. 3 5
439 23.18 temperature 30.0 1440 < th dose independent rect. 3 5
443 23.18 humidity 50.0 1440 > th dose independent rect. 3 5
448 23.18 atmosphere 995.0 1440 > th dose independent rect. 3 5
451 23.18 temperature 10.0 1440 > th dose independent rect. 8 19
462 23.20 temperature 10.0 270 > th dose independent rect. 10 10
463 23.20 atmosphere 1015.0 270 < th dose independent rect. 10 10
464 23.20 temperature 10.0 270 > th dose independent rect. 20 14
465 23.20 atmosphere 995.0 270 > th dose independent rect. 20 14
470 23.22 precipitation 0.1 10 < th dose independent rect. 7 5
472 23.22 precipitation 0.1 10 < th dose dependent rect. 7 5
476 23.23 wind 9.0 10 < th dose dependent rect. 7 5
478 23.24 humidity 50.0 270 > th dose independent rect. 20 14
481 23.25 temperature 10.0 10 > th dose independent rect. 7 5
483 23.25 atmosphere 995.0 10 > th dose independent rect. 7 5
484 23.25 atmosphere 1015.0 10 < th dose independent rect. 7 5
497 23.27 wind 9.0 10 < th dose dependent rect. 2 5
528 23.31 precipitation 0.1 270 < th dose independent rect. 20 14
530 23.31 precipitation 0.1 270 < th dose dependent rect. 20 14
534 23.33 wind 1.0 270 > th dose independent rect. 10 20
541 23.35 wind 1.0 270 > th dose independent rect. 10 10
543 23.36 wind 9.0 10 < th dose independent rect. 12 19
573 23.41 wind 9.0 90 < th dose dependent rect. 6 20
579 23.43 radiation 40.0 270 < th dose independent rect. 20 14
599 23.46 precipitation 0.1 270 < th dose independent rect. 10 10
602 23.46 atmosphere 995.0 10 > th dose independent rect. 12 19
604 23.46 precipitation 0.1 270 < th dose dependent rect. 10 10
606 23.47 precipitation 0.1 10 < th dose independent rect. 12 19
608 23.47 precipitation 0.1 10 < th dose dependent rect. 12 19
635 23.53 atmosphere 995.0 10 > th dose independent rect. 7 19
636 23.53 temperature 10.0 10 > th dose dependent rect. 7 5
647 23.54 atmosphere 995.0 270 > th dose independent rect. 10 10
652 23.55 wind 9.0 270 < th dose independent rect. 10 10
677 23.57 humidity 50.0 270 > th dose dependent rect. 1 3
685 23.60 temperature 10.0 1440 > th dose independent rect. 8 5
688 23.60 atmosphere 995.0 1440 > th dose independent rect. 8 5
690 23.60 temperature 10.0 1440 > th dose independent rect. 13 19
701 23.61 humidity 50.0 10 > th dose dependent rect. 2 5
751 23.65 atmosphere 995.0 90 > th dose independent rect. 6 20
759 23.67 atmosphere 995.0 270 > th dose independent rect. 11 18
773 23.69 humidity 50.0 270 > th dose independent rect. 14 11
780 23.70 wind 9.0 270 < th dose dependent rect. 6 4
781 23.70 humidity 50.0 270 > th dose dependent rect. 24 5
786 23.71 atmosphere 1015.0 270 < th dose independent rect. 5 19
820 23.73 atmosphere 1015.0 10 < th dose independent rect. 12 19
872 23.79 wind 7.0 270 < th dose independent rect. 6 4
889 23.81 wind 1.0 10 > th dose independent rect. 7 5
906 23.82 humidity 50.0 270 > th dose independent rect. 5 6
915 23.83 radiation 40.0 90 < th dose independent rect. 12 18
924 23.85 temperature 30.0 270 < th dose independent rect. 20 14
930 23.86 temperature 15.0 270 > th dose independent rect. 6 4
978 23.89 humidity 50.0 270 > th dose dependent rect. 2 1
987 23.91 atmosphere 1015.0 10 < th dose independent rect. 7 19