Os02g0817500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : KCNAB voltage-gated K+ channel, beta subunit family protein.
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Os02g0817500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : KCNAB voltage-gated K+ channel, beta subunit family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.97 | 0.352 | 12.5 | -0.105 | 1.33 | -0.786 | -0.932 | 1.92 | -0.0097 | 21.2 | 23.66 | 10 | -- | -- |
| 60.32 | 0.364 | 12.4 | 0.137 | 1.34 | -1.23 | -0.566 | -- | 0.0636 | 21.2 | 21.7 | 110 | -- | -- |
| 58.65 | 0.357 | 12.5 | -0.0255 | 1.35 | -0.829 | -- | 1.46 | -0.00334 | 21.2 | 23.36 | 18 | -- | -- |
| 61.37 | 0.367 | 12.4 | 0.16 | 1.35 | -1.17 | -- | -- | 0.056 | 21.3 | 22.2 | 40 | -- | -- |
| 120.73 | 0.512 | 12.5 | -0.519 | -- | -1.51 | -- | 2.2 | -0.205 | -- | 30.39 | 666 | -- | -- |
| 74.96 | 0.406 | 12.4 | 0.357 | 1.27 | -- | -0.554 | -- | 0.184 | 20.8 | -- | -- | -- | -- |
| 75.97 | 0.408 | 12.4 | 0.375 | 1.27 | -- | -- | -- | 0.184 | 20.9 | -- | -- | -- | -- |
| 129.99 | 0.531 | 12.4 | -0.00444 | -- | -1.55 | -- | -- | -0.0579 | -- | 41.64 | 671 | -- | -- |
| 61.75 | 0.366 | 12.4 | -- | 1.34 | -1.25 | -- | -- | 0.0449 | 21.3 | 22.15 | 43 | -- | -- |
| 167.39 | 0.605 | 12.4 | 0.375 | -- | -- | -- | -- | 0.175 | -- | -- | -- | -- | -- |
| 79.68 | 0.418 | 12.4 | -- | 1.26 | -- | -- | -- | 0.142 | 20.9 | -- | -- | -- | -- |
| 129.99 | 0.531 | 12.4 | -- | -- | -1.55 | -- | -- | -0.057 | -- | 59.4 | 671 | -- | -- |
| 171.1 | 0.611 | 12.4 | -- | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.96 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 2 | 52.11 | wind | 3.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 3 | 52.22 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 5 | 52.52 | wind | 3.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 6 | 52.67 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 10 | 52.99 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 15 | 53.14 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 19 | 53.19 | wind | 5.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 26 | 53.42 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 28 | 53.44 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 11 | 5 |
| 29 | 53.45 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 32 | 53.48 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 11 |
| 44 | 53.57 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 56 | 53.63 | wind | 5.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 75 | 53.79 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 83 | 53.80 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 94 | 53.84 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 95 | 53.85 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 97 | 53.86 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 101 | 53.89 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 105 | 53.90 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 107 | 53.92 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 22 | 15 |
| 126 | 54.04 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 141 | 54.12 | wind | 3.0 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 163 | 54.19 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 9 | 12 |
| 167 | 54.20 | wind | 3.0 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 174 | 54.22 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 21 | 15 |
| 183 | 54.25 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 184 | 54.25 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 194 | 54.27 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 198 | 54.28 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 11 | 11 |
| 207 | 54.30 | wind | 3.0 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 230 | 54.32 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 13 | 12 |
| 240 | 54.34 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 241 | 54.34 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 259 | 54.38 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 278 | 54.40 | humidity | 90.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 282 | 54.41 | wind | 3.0 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 315 | 54.47 | wind | 3.0 | 43200 | > th | dose independent | rect. | 13 | 14 |
| 350 | 54.54 | humidity | 50.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 385 | 54.58 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 433 | 54.66 | humidity | 80.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 434 | 54.66 | humidity | 50.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 445 | 54.68 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 446 | 54.68 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 15 | 4 |
| 527 | 54.77 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 610 | 54.85 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 632 | 54.87 | wind | 3.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 668 | 54.89 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 673 | 54.89 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 4 |
| 681 | 54.90 | wind | 3.0 | 43200 | < th | dose dependent | sin | 20 | NA |
| 690 | 54.91 | humidity | 80.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 730 | 54.94 | temperature | 10.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 739 | 54.95 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 740 | 54.95 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 760 | 54.96 | temperature | 30.0 | 43200 | < th | dose dependent | sin | 5 | NA |
| 764 | 54.96 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 774 | 54.97 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 780 | 54.97 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 931 | 55.05 | wind | 1.0 | 43200 | < th | dose independent | rect. | 8 | 18 |