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Os02g0816600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0349) R2 : 0.867
β1 : -0.797 (0.127) R2dD : 0.0119 R2D : -0.00369
β2 : 3.64 (0.115) R2dC : 0.502 R2C : 0.725
β3 : -1.93 (0.158) R2dE : 0.0745 R2E : 0.311
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1 (0.0741) R2dN8 : 0.0715 R2N8 : 0.033
σ : 0.649
deviance : 194.1
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C
peak time of C : 8.1
E
wheather : radiation
threshold : 5.657
memory length : 62
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 15.8
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
182.55 0.635 11.3 -0.868 3.65 -1.94 1.82 -0.501 -0.983 8.08 3.336 49 15.8 --
181.9 0.628 11.3 -0.853 3.68 -1.93 2.05 -- -0.988 8.13 5.031 62 15.9 --
187.77 0.638 11.3 -0.797 3.62 -1.95 -- -2.17 -0.975 8.07 3.183 53 15.7 --
194.1 0.649 11.3 -0.797 3.64 -1.93 -- -- -1 8.1 5.657 62 15.8 --
206.33 0.669 11.4 -0.783 -- -4.65 -- -1.84 -1.05 -- 74.65 41 10.9 --
246.47 0.736 11.3 -0.829 4.55 -- 1.97 -- -0.967 8.09 -- -- -- --
258.1 0.752 11.3 -0.773 4.55 -- -- -- -0.968 8.08 -- -- -- --
216.6 0.685 11.4 -0.764 -- -4.61 -- -- -1.05 -- 76.16 34 10.9 --
210.99 0.677 11.3 -- 3.68 -1.85 -- -- -0.953 8.14 6.085 62 15.8 --
1393.78 1.74 11.4 -0.733 -- -- -- -- -0.912 -- -- -- -- --
273.85 0.774 11.3 -- 4.55 -- -- -- -0.882 8.1 -- -- -- --
232.76 0.711 11.4 -- -- -4.62 -- -- -0.972 -- 74.76 28 10.8 --
1407.94 1.75 11.4 -- -- -- -- -- -0.831 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 187.62 radiation 1.0 30 < th dose dependent sin 22 NA
3 187.79 radiation 10.0 10 < th dose dependent sin 20 NA
4 187.96 radiation 1.0 30 > th dose independent sin 22 NA
5 188.07 radiation 1.0 30 < th dose independent sin 22 NA
6 188.26 temperature 20.0 270 > th dose independent rect. 15 5
7 188.32 radiation 10.0 90 < th dose dependent rect. 6 14
13 188.95 humidity 50.0 270 > th dose independent rect. 15 4
23 190.01 radiation 1.0 90 < th dose independent rect. 6 13
26 190.31 radiation 40.0 270 < th dose dependent rect. 15 4
30 190.71 radiation 30.0 270 < th dose independent rect. 15 4
32 191.14 temperature 20.0 270 > th dose independent rect. 14 7
34 191.54 radiation 10.0 10 < th dose dependent rect. 7 14
40 192.09 radiation 30.0 270 < th dose independent rect. 14 6
41 192.11 humidity 50.0 270 > th dose independent rect. 14 6
45 192.32 radiation 1.0 90 < th dose dependent rect. 11 8
48 192.41 radiation 1.0 90 < th dose dependent rect. 9 10
55 192.52 radiation 30.0 270 < th dose independent rect. 15 17
59 192.66 temperature 10.0 270 > th dose dependent rect. 15 18
60 192.68 atmosphere 995.0 270 > th dose independent rect. 15 5
63 192.74 precipitation 0.1 270 < th dose independent rect. 19 20
64 192.74 precipitation 0.1 270 < th dose dependent rect. 19 20
67 192.81 temperature 20.0 270 > th dose independent rect. 15 17
68 192.93 radiation 1.0 30 > th dose independent rect. 10 9
80 193.00 radiation 1.0 90 < th dose independent rect. 17 2
88 193.34 radiation 1.0 90 < th dose independent rect. 11 8
97 193.47 radiation 1.0 90 < th dose independent rect. 9 10
121 193.92 radiation 1.0 270 > th dose independent rect. 8 7
128 194.19 wind 9.0 270 < th dose independent rect. 15 5
131 194.22 atmosphere 995.0 270 > th dose independent rect. 15 17
139 194.39 precipitation 0.1 270 < th dose independent rect. 19 10
140 194.39 precipitation 0.1 270 < th dose dependent rect. 19 10
142 194.43 temperature 15.0 270 > th dose independent rect. 5 14
144 194.45 temperature 10.0 270 > th dose independent rect. 15 5
145 194.45 atmosphere 1015.0 270 < th dose independent rect. 15 5
146 194.45 temperature 10.0 270 > th dose independent rect. 20 19
151 194.53 radiation 1.0 90 < th dose dependent rect. 17 2
152 194.53 temperature 10.0 270 > th dose dependent rect. 16 16
153 194.54 humidity 50.0 270 > th dose independent rect. 15 17
169 194.91 temperature 20.0 90 > th dose independent rect. 17 17
195 195.12 wind 1.0 270 > th dose independent rect. 15 5
197 195.23 precipitation 0.1 270 < th dose independent rect. 8 7
198 195.23 wind 9.0 270 < th dose independent rect. 20 19
199 195.23 precipitation 0.1 270 < th dose dependent rect. 8 7
202 195.29 wind 9.0 270 < th dose independent rect. 15 17
205 195.30 humidity 50.0 10 > th dose dependent rect. 16 18
209 195.40 temperature 10.0 270 > th dose independent rect. 8 7
210 195.40 atmosphere 1015.0 270 < th dose independent rect. 8 7
211 195.40 temperature 10.0 270 > th dose independent rect. 15 17
225 195.60 wind 9.0 270 < th dose independent rect. 5 14
232 195.82 radiation 1.0 270 < th dose dependent rect. 19 10
241 195.94 wind 9.0 270 < th dose independent rect. 19 10
246 196.00 humidity 50.0 10 > th dose dependent rect. 16 5
253 196.05 temperature 10.0 270 > th dose independent rect. 19 10
254 196.05 temperature 30.0 270 < th dose independent rect. 19 10
255 196.05 humidity 50.0 270 > th dose independent rect. 19 10
256 196.05 atmosphere 995.0 270 > th dose independent rect. 19 10
257 196.05 radiation 20.0 270 < th dose independent rect. 19 10
261 196.05 atmosphere 1015.0 270 < th dose independent rect. 5 14
263 196.06 radiation 1.0 270 < th dose independent rect. 19 10
271 196.17 humidity 50.0 90 > th dose dependent rect. 16 5
281 196.35 wind 9.0 270 < th dose independent rect. 8 7
297 196.45 atmosphere 995.0 270 > th dose independent rect. 20 19
309 196.58 atmosphere 1015.0 270 < th dose independent rect. 15 17
380 197.19 atmosphere 1015.0 270 < th dose independent rect. 14 7
399 197.38 atmosphere 995.0 270 > th dose independent rect. 4 15
431 197.72 wind 1.0 270 > th dose independent rect. 8 7
433 197.73 temperature 10.0 270 > th dose dependent rect. 1 9
442 197.80 atmosphere 995.0 270 > th dose independent rect. 8 7
447 197.85 wind 1.0 270 > th dose independent rect. 19 9
492 198.28 precipitation 0.1 270 < th dose independent rect. 10 15
494 198.28 precipitation 0.1 270 < th dose dependent rect. 10 15
509 198.48 temperature 20.0 1440 > th dose independent rect. 5 2
512 198.49 radiation 40.0 270 < th dose dependent rect. 15 17
540 198.90 precipitation 0.1 270 < th dose independent rect. 15 4
541 198.90 precipitation 0.1 270 < th dose dependent rect. 15 4
557 199.04 wind 9.0 270 < th dose dependent rect. 16 3
560 199.07 wind 1.0 270 > th dose independent rect. 20 19
602 199.33 temperature 20.0 1440 < th dose independent rect. 5 2
609 199.44 temperature 20.0 1440 > th dose independent rect. 3 1
610 199.45 temperature 20.0 1440 < th dose independent rect. 3 1
630 199.64 temperature 20.0 1440 > th dose independent rect. 24 8
637 199.67 temperature 20.0 1440 < th dose independent rect. 24 8
648 199.75 temperature 20.0 1440 > th dose independent rect. 21 10
661 199.79 temperature 20.0 1440 < th dose independent rect. 21 10
708 200.00 temperature 15.0 270 > th dose independent rect. 1 9
710 200.00 atmosphere 1015.0 90 < th dose independent rect. 17 17
728 200.08 temperature 20.0 1440 > th dose independent rect. 1 3
800 200.50 temperature 20.0 1440 > th dose independent sin 9 NA
821 200.59 temperature 30.0 90 < th dose independent rect. 16 5
849 200.69 atmosphere 995.0 270 > th dose dependent rect. 15 4
854 200.73 temperature 20.0 1440 < th dose independent sin 9 NA
862 200.76 humidity 50.0 90 > th dose dependent rect. 18 1
890 200.85 temperature 20.0 1440 > th dose independent rect. 21 7
900 200.90 humidity 50.0 270 > th dose independent rect. 1 9
906 200.92 temperature 10.0 270 > th dose dependent rect. 16 3
929 201.04 wind 9.0 270 < th dose independent rect. 1 9
955 201.14 atmosphere 995.0 270 > th dose independent rect. 1 9
956 201.14 atmosphere 1015.0 270 < th dose independent rect. 1 9
959 201.14 temperature 10.0 270 > th dose independent rect. 10 15
973 201.19 temperature 10.0 270 > th dose dependent rect. 15 5
978 201.23 humidity 50.0 270 > th dose independent rect. 3 16
998 201.33 radiation 10.0 90 > th dose independent rect. 10 21