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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0816200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.73 (0.573) R2 : -0.0199
β1 : -35.2 (3.52) R2dD : 129 R2D : -180
β2 : -- (--) R2dC : -- R2C : --
β3 : 1010 (98.3) R2dE : 7940 R2E : -8000
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -6170 (601) R2dD*E : 8010 R2D*E : -7960
γ1 : -0.168 (0.0891) R2dN8 : -0.0165 R2N8 : -55.1
σ : 0.731
deviance : 243.49
__
_____
C
peak time of C : --
E
wheather : atmosphere
threshold : 1000
memory length : 30
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 17
open length of G : 5.95

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
240.15 0.728 7.02 -24.8 0.235 696 -0.134 -4260 -0.167 10.4 1000 30 17 5.97
269.18 0.77 2.99 0.00721 0.201 0.342 -0.175 -- -0.181 11 1000 30 17 5.97
240.12 0.727 8.83 -35.8 0.236 1030 -- -6280 -0.167 10.5 1000 30 17 5.95
262.23 0.759 2.98 -0.0158 0.292 1.3 -- -- -0.144 9.87 1007 10 17.8 5.69
243.49 0.731 8.73 -35.2 -- 1010 -- -6170 -0.168 -- 1000 30 17 5.95
269.42 0.77 3 0.0122 0.197 -- -0.18 -- -0.183 11.1 -- -- -- --
269.54 0.769 3 0.00554 0.198 -- -- -- -0.183 11.5 -- -- -- --
266.69 0.764 2.99 -0.0158 -- 1.12 -- -- -0.159 -- 1006 8 17.8 5.79
262.22 0.754 2.98 -- 0.298 1.29 -- -- -0.14 9.82 1007 8 17.9 5.7
271.99 0.771 3 0.000193 -- -- -- -- -0.185 -- -- -- -- --
269.54 0.768 3 -- 0.198 -- -- -- -0.184 11.5 -- -- -- --
266.69 0.761 2.99 -- -- 1.12 -- -- -0.159 -- 1006 8 17.8 5.79
271.99 0.77 3 -- -- -- -- -- -0.185 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 240.23 atmosphere 1000.0 30 < th dose dependent rect. 17 6
4 240.75 atmosphere 1000.0 10 < th dose independent rect. 17 5
13 244.27 atmosphere 1000.0 90 < th dose dependent rect. 18 3
17 247.96 atmosphere 1000.0 90 < th dose independent rect. 18 2
60 250.79 temperature 20.0 30 < th dose dependent rect. 4 4
62 250.83 temperature 20.0 10 < th dose dependent rect. 6 1
91 253.68 temperature 20.0 30 < th dose independent rect. 4 4
94 253.89 wind 7.0 10 > th dose dependent rect. 12 1
99 254.20 wind 5.0 720 > th dose dependent rect. 2 5
103 254.45 wind 3.0 90 > th dose independent rect. 4 1
104 254.46 wind 3.0 90 > th dose dependent rect. 4 1
107 254.64 wind 5.0 720 > th dose dependent rect. 5 2
119 255.08 wind 5.0 720 > th dose independent rect. 2 5
122 255.14 wind 5.0 720 > th dose independent rect. 4 3
123 255.18 wind 5.0 720 > th dose independent rect. 4 1
133 255.45 temperature 20.0 270 < th dose dependent rect. 2 1
136 255.54 temperature 20.0 270 < th dose dependent rect. 1 5
151 255.92 atmosphere 1005.0 90 < th dose independent rect. 4 18
160 256.03 atmosphere 1005.0 10 < th dose independent rect. 4 19
166 256.25 wind 3.0 1440 < th dose independent rect. 16 1
170 256.32 wind 3.0 1440 > th dose independent rect. 16 2
200 256.97 temperature 20.0 90 < th dose independent rect. 1 7
204 257.05 radiation 1.0 10 < th dose dependent rect. 5 2
215 257.29 atmosphere 1005.0 10 < th dose independent rect. 2 21
243 257.62 atmosphere 1005.0 90 < th dose independent rect. 4 11
259 257.74 wind 7.0 10 > th dose independent rect. 12 1
264 257.79 atmosphere 1005.0 90 < th dose independent rect. 20 19
270 257.83 humidity 90.0 1440 < th dose independent rect. 1 1
285 257.95 atmosphere 1005.0 10 < th dose independent rect. 4 11
288 257.98 atmosphere 1005.0 90 < th dose independent rect. 20 22
289 257.98 humidity 60.0 720 > th dose dependent rect. 18 4
296 258.01 wind 1.0 1440 < th dose dependent rect. 15 1
301 258.03 humidity 70.0 720 > th dose dependent rect. 20 1
313 258.16 atmosphere 1005.0 10 < th dose independent rect. 21 18
348 258.39 atmosphere 1005.0 270 < th dose independent rect. 1 13
355 258.46 humidity 90.0 1440 < th dose independent rect. 14 8
360 258.49 atmosphere 1005.0 270 > th dose independent rect. 21 21
371 258.56 atmosphere 1005.0 270 < th dose independent rect. 17 21
380 258.64 atmosphere 1005.0 90 > th dose independent rect. 12 23
385 258.67 wind 5.0 720 < th dose independent rect. 2 7
390 258.71 humidity 70.0 4320 < th dose independent rect. 11 1
398 258.72 wind 3.0 720 < th dose dependent rect. 20 1
422 258.80 atmosphere 1005.0 90 > th dose independent rect. 3 15
455 258.93 atmosphere 1005.0 90 > th dose independent rect. 3 22
467 259.00 atmosphere 1005.0 10 < th dose independent rect. 2 13
468 259.00 atmosphere 1005.0 10 < th dose dependent rect. 22 1
476 259.02 atmosphere 1005.0 10 > th dose independent rect. 3 23
483 259.03 atmosphere 1005.0 90 < th dose dependent rect. 20 2
487 259.05 atmosphere 1005.0 270 < th dose independent rect. 9 22
498 259.07 humidity 70.0 1440 < th dose independent rect. 12 19
508 259.09 humidity 70.0 1440 < th dose independent rect. 11 9
541 259.13 atmosphere 1005.0 90 < th dose independent sin 4 NA
544 259.14 humidity 70.0 1440 > th dose independent rect. 12 20
551 259.15 humidity 90.0 10 < th dose independent rect. 1 21
570 259.19 humidity 70.0 4320 > th dose independent rect. 11 1
572 259.19 temperature 20.0 90 < th dose dependent rect. 24 22
575 259.20 humidity 70.0 1440 > th dose independent rect. 12 11
580 259.20 humidity 70.0 1440 > th dose independent rect. 12 16
585 259.21 humidity 70.0 1440 > th dose independent rect. 12 8
632 259.33 humidity 90.0 1440 < th dose independent rect. 18 4
636 259.33 atmosphere 1005.0 270 > th dose independent rect. 9 23
639 259.34 atmosphere 1005.0 270 > th dose independent rect. 24 23
709 259.48 humidity 90.0 720 > th dose independent rect. 19 3
743 259.53 atmosphere 1005.0 10 < th dose independent sin 3 NA
749 259.53 humidity 90.0 1440 < th dose dependent rect. 16 5
772 259.56 humidity 90.0 720 > th dose independent rect. 21 1
782 259.57 atmosphere 1005.0 720 < th dose independent rect. 10 2
785 259.58 atmosphere 1005.0 10 < th dose independent rect. 4 14
789 259.59 humidity 70.0 1440 < th dose independent sin 18 NA
790 259.59 atmosphere 1005.0 90 < th dose independent no NA NA
792 259.59 atmosphere 1005.0 10 < th dose independent rect. 18 21
832 259.66 atmosphere 1005.0 270 > th dose independent no NA NA
839 259.67 humidity 70.0 1440 > th dose independent sin 17 NA
855 259.69 humidity 90.0 1440 > th dose independent rect. 14 8
888 259.72 humidity 70.0 1440 < th dose independent rect. 14 1
893 259.72 atmosphere 1005.0 10 > th dose independent rect. 12 23
894 259.72 radiation 30.0 14400 > th dose dependent rect. 16 1
938 259.77 precipitation 0.1 270 > th dose independent rect. 1 1
943 259.77 precipitation 0.1 270 > th dose dependent rect. 1 1
948 259.78 atmosphere 1005.0 90 > th dose independent sin 3 NA
968 259.81 humidity 90.0 1440 > th dose independent rect. 14 3
991 259.83 atmosphere 1005.0 10 < th dose independent rect. 11 23