Os02g0815700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to C-terminal protease precursor.
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Os02g0815700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to C-terminal protease precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.32 | 0.528 | 9.51 | -0.712 | 10.1 | 4.7 | -3.01 | -4.79 | -0.172 | 3.6 | 32.74 | 234 | 6.68 | 14.4 |
| 151.16 | 0.573 | 9.55 | -1.01 | 9.92 | 5.02 | -1.26 | -- | -0.205 | 3.43 | 31.91 | 289 | 6.13 | 14.1 |
| 137.6 | 0.546 | 9.55 | -0.936 | 9.66 | 4.46 | -- | -2.38 | -0.195 | 3.61 | 31.52 | 236 | 6.47 | 14.8 |
| 142.23 | 0.555 | 9.56 | -1.2 | 9.62 | 4.65 | -- | -- | -0.225 | 3.62 | 30.97 | 234 | 6.57 | 14.6 |
| 416.42 | 0.95 | 9.59 | -2.23 | -- | 9.61 | -- | 4.13 | -0.414 | -- | 56.91 | 531 | 17 | 12.1 |
| 408.77 | 0.948 | 9.69 | -2.1 | 8.42 | -- | 0.933 | -- | -0.792 | 3.71 | -- | -- | -- | -- |
| 411.38 | 0.95 | 9.69 | -2.11 | 8.42 | -- | -- | -- | -0.797 | 3.71 | -- | -- | -- | -- |
| 302.73 | 0.81 | 9.72 | -1.99 | -- | 9.11 | -- | -- | -0.6 | -- | 146 | 498 | 16.5 | 14.2 |
| 179.59 | 0.624 | 9.54 | -- | 9.62 | 5.07 | -- | -- | -0.0635 | 3.63 | 30.61 | 236 | 6.55 | 14.7 |
| 4337.05 | 3.08 | 9.71 | -1.76 | -- | -- | -- | -- | -0.573 | -- | -- | -- | -- | -- |
| 529.24 | 1.08 | 9.64 | -- | 8.38 | -- | -- | -- | -0.561 | 3.72 | -- | -- | -- | -- |
| 397.27 | 0.928 | 9.65 | -- | -- | 9.21 | -- | -- | -0.385 | -- | 133.5 | 496 | 16.4 | 14.4 |
| 4419.11 | 3.1 | 9.66 | -- | -- | -- | -- | -- | -0.377 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 15 |
| 2 | 136.94 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 8 |
| 14 | 156.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 17 |
| 15 | 156.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 19 |
| 26 | 162.77 | temperature | 30 | 270 | < th | dose dependent | sin | 23 | NA |
| 30 | 164.46 | temperature | 15 | 270 | > th | dose dependent | sin | 0 | NA |
| 77 | 179.81 | temperature | 15 | 90 | > th | dose dependent | sin | 21 | NA |
| 139 | 189.29 | temperature | 25 | 270 | > th | dose independent | rect. | 10 | 7 |
| 326 | 211.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 334 | 211.88 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 10 | 7 |
| 401 | 218.11 | humidity | 90 | 270 | < th | dose independent | rect. | 10 | 7 |
| 402 | 218.14 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 22 |
| 425 | 219.80 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 8 |
| 535 | 227.40 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 2 |
| 570 | 229.17 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 15 |
| 808 | 238.83 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 23 | 17 |
| 819 | 239.20 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 15 |