Os02g0815300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0815300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.06 | 0.423 | 14.3 | -1.9 | 1.22 | 0.864 | 0.531 | -1.17 | -0.635 | 7.15 | 20.7 | 9 | -- | -- |
| 82.18 | 0.425 | 14.3 | -1.72 | 1.21 | 0.865 | 0.528 | -- | -0.583 | 7.16 | 18.04 | 8 | -- | -- |
| 81.67 | 0.424 | 14.3 | -1.87 | 1.22 | 0.853 | -- | -1.12 | -0.629 | 7.18 | 20.7 | 9 | -- | -- |
| 82.86 | 0.427 | 14.3 | -1.71 | 1.21 | 0.867 | -- | -- | -0.578 | 7.24 | 17.1 | 6 | -- | -- |
| 157.8 | 0.588 | 14.3 | -1.8 | -- | 0.658 | -- | -1.03 | -0.567 | -- | 17.2 | 7 | -- | -- |
| 91.64 | 0.449 | 14.3 | -1.53 | 1.16 | -- | 0.252 | -- | -0.443 | 8.12 | -- | -- | -- | -- |
| 91.83 | 0.449 | 14.3 | -1.53 | 1.16 | -- | -- | -- | -0.443 | 8.14 | -- | -- | -- | -- |
| 158.81 | 0.59 | 14.3 | -1.64 | -- | 0.713 | -- | -- | -0.523 | -- | 13.2 | 3 | -- | -- |
| 152.85 | 0.579 | 14.2 | -- | 1.15 | 0.153 | -- | -- | -0.293 | 8.07 | 17.1 | 6 | -- | -- |
| 166.03 | 0.602 | 14.3 | -1.52 | -- | -- | -- | -- | -0.429 | -- | -- | -- | -- | -- |
| 153.16 | 0.579 | 14.2 | -- | 1.15 | -- | -- | -- | -0.273 | 8.23 | -- | -- | -- | -- |
| 225.72 | 0.702 | 14.3 | -- | -- | 0.196 | -- | -- | -0.288 | -- | 20.2 | 2 | -- | -- |
| 226.63 | 0.703 | 14.2 | -- | -- | -- | -- | -- | -0.261 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.84 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 20 |
| 2 | 72.93 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 4 | 73.06 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 18 |
| 7 | 73.25 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 10 | 73.44 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 13 | 73.74 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 14 | 73.79 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 21 | 74.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 16 |
| 27 | 74.15 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 18 |
| 35 | 74.39 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 49 | 74.86 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 10 | 15 |
| 54 | 74.94 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 7 |
| 84 | 75.46 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 114 | 75.84 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 1 | 22 |
| 117 | 75.85 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 1 | 22 |
| 133 | 76.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 23 |
| 135 | 76.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 161 | 76.38 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 9 |
| 187 | 76.63 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 19 |
| 225 | 76.90 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 10 | 15 |
| 236 | 76.97 | temperature | 25.0 | 270 | > th | dose independent | rect. | 18 | 20 |
| 245 | 77.04 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 1 | 9 |
| 252 | 77.07 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 258 | 77.11 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 263 | 77.13 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 270 | 77.16 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 18 |
| 293 | 77.30 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 14 | 9 |
| 326 | 77.44 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 22 | 7 |
| 352 | 77.54 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 8 |
| 376 | 77.65 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 382 | 77.67 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 385 | 77.69 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 22 | 7 |
| 401 | 77.79 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 17 |
| 409 | 77.82 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 17 |
| 414 | 77.85 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 415 | 77.86 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 416 | 77.86 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 18 |
| 417 | 77.87 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 22 | 7 |
| 420 | 77.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 18 |
| 422 | 77.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 18 |
| 427 | 77.90 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 428 | 77.90 | temperature | 25.0 | 90 | > th | dose independent | rect. | 21 | 19 |
| 438 | 77.93 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 448 | 77.97 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 15 |
| 492 | 78.12 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 6 |
| 537 | 78.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 15 |
| 540 | 78.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 15 |
| 550 | 78.24 | temperature | 15.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 566 | 78.30 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 576 | 78.32 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 21 | 18 |
| 581 | 78.34 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 587 | 78.36 | temperature | 25.0 | 90 | < th | dose independent | rect. | 24 | 21 |
| 599 | 78.39 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 24 | 5 |
| 605 | 78.40 | humidity | 90.0 | 270 | < th | dose independent | rect. | 21 | 3 |
| 635 | 78.46 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 7 |
| 636 | 78.46 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 653 | 78.50 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 21 | 19 |
| 659 | 78.52 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 684 | 78.60 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 20 |
| 735 | 78.73 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 750 | 78.78 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 771 | 78.81 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 12 |
| 793 | 78.85 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 17 |
| 809 | 78.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 810 | 78.87 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 812 | 78.87 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 821 | 78.88 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 852 | 78.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 8 |
| 856 | 78.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 8 |
| 866 | 78.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 889 | 78.98 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 928 | 79.02 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 15 | 6 |
| 935 | 79.03 | humidity | 90.0 | 90 | < th | dose independent | rect. | 21 | 19 |
| 958 | 79.08 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 4 |
| 968 | 79.10 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 7 | 1 |