Os02g0815100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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Os02g0815100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 219.36 | 0.696 | 2.96 | 0.0146 | 0.396 | 0.488 | 1.27 | 2.08 | -0.0774 | 19.6 | 24.7 | 762 | -- | -- |
| 226.96 | 0.702 | 2.91 | 0.582 | 0.329 | 0.493 | 0.668 | -- | 0.103 | 19.7 | 24.56 | 740 | -- | -- |
| 223 | 0.696 | 2.94 | 0.108 | 0.336 | 0.481 | -- | 1.64 | -0.0515 | 19.3 | 24.8 | 889 | -- | -- |
| 226.97 | 0.702 | 2.89 | 0.627 | 0.363 | 0.613 | -- | -- | 0.12 | 19.8 | 24.7 | 889 | -- | -- |
| 225.01 | 0.699 | 2.94 | 0.0734 | -- | 0.54 | -- | 1.82 | -0.0507 | -- | 24.9 | 1280 | -- | -- |
| 238.93 | 0.725 | 2.93 | 0.424 | 0.257 | -- | 0.53 | -- | -0.105 | 17.7 | -- | -- | -- | -- |
| 239.59 | 0.725 | 2.93 | 0.421 | 0.261 | -- | -- | -- | -0.103 | 17.4 | -- | -- | -- | -- |
| 229.45 | 0.705 | 2.88 | 0.626 | -- | 0.639 | -- | -- | 0.122 | -- | 24.71 | 1230 | -- | -- |
| 236.48 | 0.716 | 2.91 | -- | 0.296 | 0.497 | -- | -- | 0.00705 | 19.7 | 25.2 | 1003 | -- | -- |
| 243.13 | 0.729 | 2.93 | 0.412 | -- | -- | -- | -- | -0.109 | -- | -- | -- | -- | -- |
| 244.26 | 0.731 | 2.94 | -- | 0.254 | -- | -- | -- | -0.15 | 17.5 | -- | -- | -- | -- |
| 238.91 | 0.72 | 2.9 | -- | -- | 0.505 | -- | -- | 0.018 | -- | 24.9 | 1250 | -- | -- |
| 247.61 | 0.734 | 2.94 | -- | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 207.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 2 | 207.79 | humidity | 70 | 1440 | > th | dose dependent | rect. | 4 | 2 |
| 17 | 209.40 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 3 |
| 21 | 209.85 | temperature | 25 | 720 | < th | dose independent | rect. | 11 | 5 |
| 43 | 210.78 | humidity | 90 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 67 | 212.40 | temperature | 25 | 720 | > th | dose independent | rect. | 11 | 6 |
| 69 | 212.79 | humidity | 90 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 97 | 213.86 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 1 |
| 107 | 214.05 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 112 | 214.19 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 9 |
| 120 | 214.43 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 9 |
| 124 | 214.53 | humidity | 50 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 136 | 214.69 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 1 |
| 139 | 214.80 | wind | 5 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 162 | 215.04 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 12 |
| 172 | 215.21 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 11 | 1 |
| 181 | 215.26 | temperature | 25 | 90 | < th | dose dependent | rect. | 14 | 3 |
| 194 | 215.34 | wind | 5 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 222 | 215.61 | temperature | 25 | 720 | > th | dose independent | sin | 21 | NA |
| 223 | 215.61 | humidity | 90 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 235 | 215.71 | temperature | 25 | 720 | < th | dose independent | sin | 22 | NA |
| 291 | 216.35 | wind | 5 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 302 | 216.50 | temperature | 30 | 90 | < th | dose dependent | rect. | 14 | 19 |
| 310 | 216.61 | humidity | 90 | 1440 | < th | dose dependent | rect. | 23 | 8 |
| 314 | 216.69 | wind | 5 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 337 | 216.84 | temperature | 25 | 720 | < th | dose dependent | sin | 21 | NA |
| 343 | 216.89 | wind | 5 | 10 | > th | dose dependent | rect. | 20 | 2 |
| 358 | 217.04 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 18 |
| 359 | 217.05 | temperature | 25 | 90 | < th | dose independent | rect. | 14 | 3 |
| 364 | 217.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 17 |
| 373 | 217.17 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 20 |
| 378 | 217.22 | temperature | 25 | 10 | < th | dose dependent | sin | 21 | NA |
| 387 | 217.27 | wind | 7 | 270 | > th | dose dependent | rect. | 20 | 1 |
| 394 | 217.34 | wind | 5 | 10 | > th | dose independent | rect. | 20 | 2 |
| 401 | 217.42 | temperature | 25 | 720 | < th | dose independent | rect. | 4 | 18 |
| 440 | 217.65 | humidity | 90 | 1440 | > th | dose independent | rect. | 23 | 7 |
| 453 | 217.72 | wind | 7 | 270 | > th | dose independent | rect. | 20 | 1 |
| 482 | 217.86 | humidity | 90 | 90 | > th | dose independent | rect. | 14 | 1 |
| 485 | 217.86 | humidity | 90 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 509 | 217.99 | radiation | 1 | 10 | < th | dose independent | rect. | 15 | 1 |
| 516 | 218.00 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 579 | 218.26 | humidity | 80 | 30 | < th | dose dependent | rect. | 20 | 2 |
| 596 | 218.35 | temperature | 25 | 720 | > th | dose independent | rect. | 5 | 17 |
| 601 | 218.37 | humidity | 80 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 607 | 218.40 | temperature | 25 | 720 | > th | dose independent | rect. | 5 | 14 |
| 623 | 218.45 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 637 | 218.46 | temperature | 25 | 720 | > th | dose independent | rect. | 10 | 22 |
| 657 | 218.51 | wind | 3 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 682 | 218.58 | temperature | 25 | 90 | < th | dose dependent | sin | 21 | NA |
| 684 | 218.59 | wind | 5 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 732 | 218.73 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 748 | 218.79 | humidity | 90 | 1440 | < th | dose independent | rect. | 23 | 7 |
| 817 | 219.03 | temperature | 25 | 90 | < th | dose independent | rect. | 14 | 9 |
| 828 | 219.09 | wind | 9 | 1440 | > th | dose independent | rect. | 22 | 4 |
| 841 | 219.09 | wind | 9 | 1440 | > th | dose dependent | rect. | 22 | 4 |
| 852 | 219.11 | wind | 9 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 858 | 219.11 | wind | 9 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 882 | 219.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 7 |
| 883 | 219.17 | wind | 7 | 90 | > th | dose independent | rect. | 22 | 1 |
| 889 | 219.17 | wind | 7 | 90 | > th | dose dependent | rect. | 22 | 1 |
| 931 | 219.25 | temperature | 25 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 932 | 219.25 | temperature | 25 | 10 | < th | dose dependent | rect. | 2 | 22 |
| 936 | 219.26 | temperature | 25 | 720 | > th | dose independent | rect. | 21 | 22 |
| 944 | 219.29 | wind | 9 | 90 | > th | dose independent | rect. | 22 | 12 |
| 1000 | 219.32 | temperature | 25 | 720 | < th | dose independent | rect. | 18 | 23 |