FiT-DB / Search/ Help/ Sample detail

Os02g0814800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glutathione S-transferase, C-terminal-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.022) R2 : 0.0849
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.301 (0.0462) R2dN8 : 0.11 R2N8 : 0.0849
σ : 0.413
deviance : 78.44
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
55.43 0.35 11.8 0.909 0.271 -0.303 -0.483 2.11 -0.0385 22.4 19.76 2935 -- --
58.51 0.356 11.8 1.05 0.284 -0.94 -0.576 -- -0.0403 21.6 14.5 47520 -- --
56.36 0.35 11.8 0.93 0.272 -0.311 -- 2.14 -0.0372 22.3 19.7 2969 -- --
59.59 0.36 11.8 1.09 0.285 -0.97 -- -- -0.0326 22.2 14.58 47520 -- --
60.89 0.363 11.8 0.934 -- -0.302 -- 2.17 -0.0395 -- 19.7 2983 -- --
70.95 0.395 11.9 0.22 0.275 -- -0.562 -- -0.275 22 -- -- -- --
72.19 0.398 11.9 0.242 0.278 -- -- -- -0.274 22.1 -- -- -- --
64.5 0.374 11.8 1.09 -- -0.96 -- -- -0.0344 -- 14.59 47520 -- --
71.46 0.394 11.9 -- 0.281 -0.273 -- -- -0.268 22.2 11.72 47520 -- --
76.85 0.41 11.9 0.246 -- -- -- -- -0.273 -- -- -- -- --
73.73 0.402 11.9 -- 0.279 -- -- -- -0.301 22.2 -- -- -- --
75.54 0.405 11.9 -- -- -0.303 -- -- -0.271 -- 8.386 47520 -- --
78.44 0.413 11.9 -- -- -- -- -- -0.301 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 50.94 wind 1 43200 > th dose independent rect. 2 1
2 51.61 wind 1 43200 < th dose independent rect. 2 1
3 52.10 wind 3 43200 < th dose dependent rect. 9 3
5 52.52 wind 1 43200 > th dose independent rect. 9 2
9 52.67 wind 1 43200 < th dose dependent rect. 2 1
10 52.70 wind 3 43200 > th dose independent rect. 12 2
11 52.73 wind 3 43200 < th dose independent rect. 11 3
14 52.88 temperature 20 1440 < th dose independent rect. 5 1
17 52.97 wind 3 43200 < th dose dependent rect. 8 6
18 52.98 wind 1 43200 < th dose independent rect. 9 2
25 53.29 humidity 90 14400 > th dose independent rect. 23 1
27 53.35 humidity 90 14400 > th dose independent rect. 22 3
31 53.46 humidity 90 14400 < th dose independent rect. 23 2
36 53.50 temperature 20 1440 > th dose independent rect. 5 2
40 53.57 radiation 1 14400 > th dose independent rect. 18 12
43 53.63 humidity 90 14400 > th dose independent rect. 22 5
49 53.79 radiation 1 14400 < th dose independent rect. 18 12
51 53.82 humidity 90 14400 < th dose independent rect. 22 5
54 53.93 humidity 90 14400 > th dose independent rect. 21 7
56 53.94 wind 3 43200 > th dose independent rect. 9 7
73 54.09 humidity 90 14400 > th dose independent rect. 22 10
78 54.13 radiation 1 14400 < th dose dependent rect. 24 5
92 54.28 wind 1 43200 > th dose independent rect. 24 1
94 54.28 radiation 1 14400 < th dose dependent rect. 22 7
100 54.33 radiation 1 14400 > th dose independent rect. 18 1
117 54.37 humidity 90 14400 > th dose independent rect. 17 11
131 54.47 humidity 90 14400 > th dose independent rect. 15 15
140 54.51 humidity 90 14400 > th dose independent sin 12 NA
145 54.52 wind 1 43200 < th dose dependent rect. 8 18
167 54.63 humidity 90 14400 < th dose independent rect. 22 10
242 54.93 humidity 90 14400 > th dose dependent rect. 23 2
258 55.01 temperature 20 1440 < th dose independent rect. 20 11
266 55.04 temperature 20 1440 > th dose independent rect. 20 11
269 55.05 humidity 90 14400 < th dose independent sin 11 NA
330 55.21 wind 3 43200 < th dose independent rect. 8 13
334 55.22 wind 3 43200 < th dose independent sin 23 NA
340 55.24 wind 3 43200 > th dose independent sin 23 NA
341 55.24 temperature 20 4320 > th dose independent rect. 21 2
342 55.24 wind 3 43200 > th dose independent rect. 8 13
357 55.26 humidity 80 43200 < th dose dependent rect. 20 5
384 55.31 humidity 80 43200 < th dose dependent rect. 19 7
396 55.34 wind 1 43200 > th dose independent rect. 23 3
419 55.38 radiation 20 4320 < th dose independent rect. 17 7
426 55.39 temperature 20 4320 < th dose independent rect. 21 2
434 55.41 wind 1 43200 < th dose independent rect. 24 1
435 55.41 temperature 20 4320 > th dose independent rect. 20 4
438 55.41 radiation 40 43200 < th dose dependent rect. 24 5
459 55.45 humidity 90 14400 > th dose dependent rect. 23 19
480 55.48 humidity 90 14400 > th dose dependent rect. 5 2
488 55.51 temperature 20 4320 < th dose independent rect. 20 4
508 55.54 temperature 20 4320 > th dose independent rect. 18 6
521 55.56 temperature 20 1440 > th dose dependent rect. 6 2
523 55.56 temperature 20 1440 > th dose dependent rect. 17 6
549 55.60 temperature 20 4320 > th dose independent rect. 17 8
554 55.60 wind 1 43200 < th dose dependent rect. 24 1
557 55.61 temperature 20 4320 < th dose independent rect. 18 6
566 55.62 temperature 20 1440 > th dose independent sin 11 NA
574 55.62 humidity 80 43200 < th dose dependent rect. 24 1
582 55.64 radiation 20 4320 < th dose independent rect. 17 5
596 55.65 wind 3 43200 < th dose dependent rect. 8 14
602 55.66 temperature 20 1440 > th dose dependent rect. 18 4
610 55.67 temperature 20 1440 < th dose independent sin 11 NA
630 55.69 temperature 20 1440 > th dose dependent rect. 19 2
635 55.70 radiation 20 4320 < th dose independent rect. 17 3
663 55.73 wind 9 43200 < th dose independent rect. 24 2
676 55.74 wind 5 43200 < th dose dependent sin 23 NA
685 55.75 radiation 40 43200 < th dose dependent rect. 22 7
695 55.76 humidity 90 14400 > th dose dependent rect. 12 19
707 55.79 wind 1 43200 < th dose independent rect. 23 3
810 55.89 radiation 1 14400 < th dose independent rect. 18 8
822 55.89 wind 3 43200 < th dose dependent rect. 6 16
840 55.91 humidity 50 43200 > th dose independent rect. 3 6
850 55.92 radiation 1 14400 > th dose independent rect. 5 2
862 55.93 radiation 1 14400 < th dose independent rect. 18 1
864 55.93 radiation 1 14400 < th dose independent rect. 5 2
894 55.95 radiation 1 14400 < th dose independent rect. 18 3
933 55.98 wind 1 43200 > th dose dependent rect. 12 4
949 55.99 humidity 90 14400 > th dose dependent rect. 22 11
954 56.00 radiation 20 1440 < th dose independent rect. 11 1
1000 56.03 humidity 90 14400 > th dose dependent rect. 4 4