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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0814200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to CER1-like gene protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.98 (0.045) R2 : 0.233
β1 : -1.13 (0.17) R2dD : 0.0819 R2D : -0.0336
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.15 (0.129) R2dE : 0.144 R2E : 0.0571
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.724 (0.0963) R2dN8 : 0.128 R2N8 : 0.0589
σ : 0.842
deviance : 326.77
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 26.2
memory length : 1274
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
319.35 0.84 4.1 -2.16 0.0942 1.54 0.943 -3.81 -0.952 8.78 26.12 1342 -- --
322.21 0.836 3.97 -1.15 0.252 1.36 1.42 -- -0.685 7.78 26.57 1056 -- --
320.12 0.833 4.09 -2.03 0.286 1.67 -- -3.72 -0.94 12.3 25.98 1196 -- --
322.73 0.837 3.97 -1.14 0.29 1.3 -- -- -0.719 12.2 26.17 1153 -- --
322.9 0.837 4.09 -2.03 -- 1.52 -- -3.54 -0.911 -- 26.2 1340 -- --
380.46 0.914 3.96 -0.778 0.0262 -- 1.18 -- -0.659 7.2 -- -- -- --
384.15 0.918 3.96 -0.752 0.0351 -- -- -- -0.661 9.82 -- -- -- --
326.77 0.842 3.98 -1.13 -- 1.15 -- -- -0.724 -- 26.2 1274 -- --
353.82 0.876 3.92 -- 0.245 1.06 -- -- -0.502 11.9 27.65 1116 -- --
384.22 0.916 3.96 -0.753 -- -- -- -- -0.661 -- -- -- -- --
399.07 0.934 3.94 -- 0.0401 -- -- -- -0.577 11.3 -- -- -- --
357.13 0.88 3.93 -- -- 0.961 -- -- -0.505 -- 27.8 1164 -- --
399.17 0.933 3.94 -- -- -- -- -- -0.577 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 301.67 wind 7 43200 > th dose independent rect. 6 1
2 302.12 wind 9 43200 > th dose dependent rect. 18 13
3 302.38 wind 7 43200 < th dose independent rect. 6 1
6 305.81 wind 9 43200 > th dose independent rect. 18 14
10 308.30 wind 9 43200 < th dose independent rect. 18 14
14 309.81 atmosphere 995 43200 > th dose independent rect. 12 1
15 310.10 atmosphere 995 43200 < th dose dependent rect. 12 4
16 310.26 atmosphere 995 43200 < th dose independent rect. 7 8
20 310.53 wind 9 43200 > th dose dependent rect. 18 7
27 311.01 wind 9 43200 > th dose dependent rect. 19 2
29 311.10 atmosphere 995 43200 < th dose dependent rect. 14 1
30 311.31 wind 5 43200 < th dose independent rect. 4 15
35 311.49 wind 9 43200 > th dose independent rect. 18 7
41 311.67 wind 9 43200 < th dose independent rect. 18 3
45 311.85 wind 5 43200 > th dose independent rect. 5 14
50 312.01 wind 7 43200 > th dose dependent rect. 13 22
55 312.12 wind 5 43200 > th dose dependent rect. 5 16
57 312.15 wind 3 43200 > th dose dependent rect. 5 12
61 312.23 wind 3 43200 > th dose dependent rect. 4 14
70 312.32 atmosphere 995 43200 > th dose independent rect. 7 8
75 312.40 wind 9 43200 > th dose independent rect. 18 3
86 312.47 wind 7 43200 > th dose dependent rect. 2 19
88 312.48 wind 9 43200 > th dose independent rect. 18 21
89 312.48 wind 7 43200 > th dose dependent rect. 24 21
99 312.56 wind 9 43200 < th dose independent rect. 18 21
112 312.72 wind 5 43200 < th dose independent sin 23 NA
130 312.90 wind 3 43200 > th dose dependent sin 0 NA
138 312.98 wind 5 43200 < th dose independent rect. 11 21
144 313.07 wind 5 43200 > th dose independent sin 23 NA
153 313.15 atmosphere 995 43200 < th dose independent rect. 15 1
179 313.28 atmosphere 995 43200 > th dose independent rect. 15 1
190 313.36 wind 7 43200 > th dose dependent rect. 18 22
192 313.38 wind 5 43200 < th dose independent rect. 9 8
194 313.40 wind 3 43200 > th dose dependent rect. 9 7
208 313.53 wind 5 43200 > th dose independent rect. 9 8
219 313.60 wind 5 43200 > th dose independent rect. 11 21
223 313.62 wind 5 43200 < th dose independent rect. 13 19
272 313.95 wind 5 43200 > th dose independent rect. 13 19
343 314.37 wind 9 43200 < th dose independent rect. 18 7
398 314.65 radiation 1 43200 < th dose dependent rect. 19 9
401 314.66 wind 7 43200 > th dose dependent rect. 5 20
455 314.86 wind 7 43200 > th dose dependent rect. 2 23
487 314.98 wind 7 43200 > th dose independent rect. 13 22
519 315.09 wind 9 43200 < th dose independent rect. 13 22
534 315.13 wind 7 43200 > th dose dependent no NA NA
625 315.42 wind 9 43200 > th dose dependent sin 12 NA
673 315.59 wind 7 43200 > th dose dependent rect. 10 23
715 315.69 radiation 1 43200 < th dose dependent rect. 21 7
840 316.06 wind 5 43200 > th dose dependent rect. 15 1
885 316.22 wind 3 43200 > th dose dependent no NA NA
903 316.28 wind 3 43200 > th dose dependent rect. 20 23
963 316.43 radiation 1 43200 < th dose dependent rect. 1 1
996 316.53 wind 5 43200 > th dose dependent rect. 13 14