Os02g0813800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to STYLOSA protein.
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Os02g0813800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to STYLOSA protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.84 | 0.44 | 7.89 | 0.18 | 2.27 | 1.25 | 1.01 | 2.47 | 0.0999 | 7.42 | 19.51 | 7 | -- | -- |
| 93.12 | 0.453 | 7.93 | -0.226 | 2.27 | 1.37 | 1.09 | -- | -0.0142 | 7.42 | 20.9 | 8 | -- | -- |
| 90.44 | 0.446 | 7.89 | 0.222 | 2.27 | 1.26 | -- | 2.6 | 0.103 | 7.39 | 19.51 | 7 | -- | -- |
| 96.25 | 0.46 | 7.94 | -0.212 | 2.28 | 1.41 | -- | -- | -0.0243 | 7.33 | 20.8 | 7 | -- | -- |
| 360.88 | 0.885 | 7.93 | 0.275 | -- | 1.17 | -- | 2.94 | 0.183 | -- | 14.78 | 2 | -- | -- |
| 120.83 | 0.515 | 7.88 | 0.0375 | 2.19 | -- | 1.33 | -- | 0.212 | 8.31 | -- | -- | -- | -- |
| 126.13 | 0.526 | 7.88 | 0.075 | 2.19 | -- | -- | -- | 0.21 | 8.22 | -- | -- | -- | -- |
| 366.68 | 0.892 | 7.98 | -0.113 | -- | 1.03 | -- | -- | 0.0694 | -- | 19.81 | 2 | -- | -- |
| 97.35 | 0.462 | 7.93 | -- | 2.27 | 1.34 | -- | -- | 0.00905 | 7.38 | 20.75 | 5 | -- | -- |
| 390.66 | 0.924 | 7.94 | 0.0914 | -- | -- | -- | -- | 0.235 | -- | -- | -- | -- | -- |
| 126.28 | 0.526 | 7.88 | -- | 2.19 | -- | -- | -- | 0.202 | 8.21 | -- | -- | -- | -- |
| 366.98 | 0.892 | 7.97 | -- | -- | 1 | -- | -- | 0.085 | -- | 19.8 | 2 | -- | -- |
| 390.88 | 0.923 | 7.94 | -- | -- | -- | -- | -- | 0.225 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.51 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 19 |
| 55 | 85.85 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 19 |
| 59 | 86.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 17 |
| 86 | 87.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 88 | 87.14 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 89 | 87.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 103 | 87.57 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 114 | 87.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 128 | 88.10 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 131 | 88.14 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 137 | 88.29 | temperature | 15 | 10 | > th | dose dependent | sin | 3 | NA |
| 148 | 88.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 151 | 88.51 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 153 | 88.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 157 | 88.62 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 159 | 88.68 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 172 | 88.87 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 188 | 89.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 244 | 89.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 253 | 89.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 264 | 90.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 273 | 90.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 277 | 90.30 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 341 | 90.96 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 342 | 90.96 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 343 | 90.97 | temperature | 25 | 30 | > th | dose independent | rect. | 6 | 20 |
| 372 | 91.33 | temperature | 30 | 90 | < th | dose independent | rect. | 1 | 17 |
| 400 | 91.54 | temperature | 30 | 10 | < th | dose dependent | sin | 5 | NA |
| 438 | 91.94 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 11 |
| 454 | 92.06 | radiation | 20 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 489 | 92.32 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 511 | 92.52 | radiation | 20 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 523 | 92.64 | radiation | 20 | 10 | < th | dose dependent | no | NA | NA |
| 569 | 92.97 | radiation | 20 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 633 | 93.40 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 686 | 93.77 | temperature | 25 | 90 | > th | dose independent | rect. | 17 | 23 |
| 688 | 93.77 | radiation | 20 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 717 | 93.97 | radiation | 20 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 721 | 94.03 | temperature | 25 | 90 | < th | dose independent | rect. | 23 | 22 |
| 741 | 94.15 | temperature | 25 | 30 | < th | dose independent | rect. | 24 | 20 |
| 804 | 94.55 | temperature | 25 | 30 | > th | dose independent | rect. | 20 | 20 |
| 876 | 95.03 | radiation | 20 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 905 | 95.23 | temperature | 25 | 30 | > th | dose independent | no | NA | NA |
| 948 | 95.53 | radiation | 20 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 955 | 95.55 | temperature | 25 | 30 | > th | dose independent | rect. | 20 | 23 |
| 995 | 95.77 | temperature | 25 | 90 | < th | dose independent | rect. | 11 | 22 |