Os02g0812000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NAD-dependent epimerase/dehydratase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0812000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : NAD-dependent epimerase/dehydratase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.81 | 0.453 | 2.75 | 0.185 | 0.083 | 0.588 | 0.186 | 2.52 | 0.107 | 5 | 46.25 | 88 | -- | -- |
| 99.2 | 0.464 | 2.74 | 0.207 | 0.0807 | 0.35 | -0.199 | -- | 0.101 | 4.4 | 44.67 | 108 | -- | -- |
| 92.88 | 0.449 | 2.75 | 0.186 | 0.0843 | 0.592 | -- | 2.48 | 0.107 | 4.81 | 46.29 | 87 | -- | -- |
| 99.06 | 0.464 | 2.74 | 0.195 | 0.0886 | 0.38 | -- | -- | 0.114 | 4.31 | 43.22 | 133 | -- | -- |
| 93.13 | 0.449 | 2.75 | 0.183 | -- | 0.578 | -- | 2.51 | 0.111 | -- | 46.72 | 87 | -- | -- |
| 99.85 | 0.468 | 2.73 | 0.167 | 0.0888 | -- | 0.44 | -- | 0.13 | 10 | -- | -- | -- | -- |
| 100.59 | 0.47 | 2.73 | 0.183 | 0.0904 | -- | -- | -- | 0.131 | 9.17 | -- | -- | -- | -- |
| 99.45 | 0.464 | 2.73 | 0.198 | -- | 0.345 | -- | -- | 0.123 | -- | 41.92 | 144 | -- | -- |
| 99.99 | 0.466 | 2.74 | -- | 0.0922 | 0.371 | -- | -- | 0.0912 | 4.27 | 42.02 | 143 | -- | -- |
| 101.06 | 0.47 | 2.73 | 0.183 | -- | -- | -- | -- | 0.131 | -- | -- | -- | -- | -- |
| 101.47 | 0.471 | 2.73 | -- | 0.0905 | -- | -- | -- | 0.11 | 9.02 | -- | -- | -- | -- |
| 100.41 | 0.467 | 2.74 | -- | -- | 0.308 | -- | -- | 0.0966 | -- | 42.09 | 143 | -- | -- |
| 101.94 | 0.471 | 2.74 | -- | -- | -- | -- | -- | 0.111 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.82 | humidity | 50.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 93 | 75.82 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 185 | 90.17 | radiation | 40.0 | 90 | > th | dose independent | rect. | 10 | 2 |
| 228 | 93.72 | radiation | 40.0 | 90 | > th | dose independent | rect. | 14 | 22 |
| 229 | 93.82 | radiation | 40.0 | 90 | > th | dose independent | rect. | 10 | 5 |
| 249 | 93.93 | radiation | 30.0 | 90 | > th | dose dependent | rect. | 10 | 2 |
| 296 | 94.47 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 320 | 94.54 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 1 |
| 336 | 94.54 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 419 | 95.05 | wind | 5.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 421 | 95.10 | temperature | 25.0 | 90 | > th | dose independent | rect. | 10 | 2 |
| 422 | 95.12 | humidity | 60.0 | 30 | < th | dose independent | sin | 8 | NA |
| 428 | 95.23 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 429 | 95.25 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 477 | 95.37 | humidity | 60.0 | 90 | > th | dose independent | sin | 8 | NA |
| 479 | 95.37 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 16 |
| 485 | 95.44 | temperature | 25.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 519 | 95.59 | radiation | 40.0 | 90 | > th | dose independent | sin | 1 | NA |
| 528 | 95.66 | wind | 5.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 575 | 95.74 | radiation | 30.0 | 90 | > th | dose dependent | rect. | 10 | 5 |
| 576 | 95.74 | radiation | 30.0 | 90 | > th | dose dependent | rect. | 14 | 22 |
| 579 | 95.75 | radiation | 40.0 | 90 | < th | dose independent | rect. | 11 | 23 |
| 599 | 95.77 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 12 |
| 627 | 95.82 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 10 | 5 |
| 628 | 95.83 | radiation | 40.0 | 90 | < th | dose independent | sin | 0 | NA |
| 636 | 95.85 | wind | 5.0 | 90 | < th | dose independent | rect. | 11 | 1 |
| 638 | 95.86 | radiation | 40.0 | 90 | > th | dose independent | no | NA | NA |
| 849 | 95.94 | radiation | 40.0 | 90 | < th | dose independent | rect. | 23 | 23 |
| 894 | 96.01 | humidity | 80.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 897 | 96.01 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 921 | 96.05 | wind | 7.0 | 90 | < th | dose dependent | rect. | 11 | 1 |
| 928 | 96.08 | radiation | 40.0 | 90 | < th | dose independent | no | NA | NA |