Os02g0811200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os02g0811200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.17 | 0.254 | 2.91 | -0.031 | 0.0849 | -0.0616 | 0.0632 | -0.655 | 0.0453 | 5.34 | 37 | 1361 | -- | -- |
| 29.67 | 0.254 | 2.91 | 0.0352 | 0.0817 | -0.142 | 0.0408 | -- | 0.0694 | 5.33 | 40 | 2838 | -- | -- |
| 29.18 | 0.252 | 2.92 | -0.0309 | 0.0844 | -0.06 | -- | -0.657 | 0.0443 | 5.6 | 37 | 1342 | -- | -- |
| 29.67 | 0.254 | 2.91 | 0.0419 | 0.0801 | -0.139 | -- | -- | 0.068 | 5.63 | 40 | 2839 | -- | -- |
| 29.56 | 0.253 | 2.92 | -0.0276 | -- | -0.0543 | -- | -0.648 | 0.0458 | -- | 37 | 1340 | -- | -- |
| 30.09 | 0.257 | 2.91 | 0.0368 | 0.0812 | -- | -0.000271 | -- | 0.0534 | 6.18 | -- | -- | -- | -- |
| 30.09 | 0.257 | 2.91 | 0.0368 | 0.0812 | -- | -- | -- | 0.0534 | 6.18 | -- | -- | -- | -- |
| 29.87 | 0.255 | 2.91 | 0.0487 | -- | -0.164 | -- | -- | 0.0692 | -- | 39.63 | 2327 | -- | -- |
| 29.71 | 0.254 | 2.91 | -- | 0.0835 | -0.141 | -- | -- | 0.0614 | 5.71 | 41.33 | 2875 | -- | -- |
| 30.43 | 0.258 | 2.91 | 0.0391 | -- | -- | -- | -- | 0.0552 | -- | -- | -- | -- | -- |
| 30.13 | 0.257 | 2.91 | -- | 0.0817 | -- | -- | -- | 0.0493 | 6.16 | -- | -- | -- | -- |
| 29.91 | 0.255 | 2.91 | -- | -- | -0.171 | -- | -- | 0.0714 | -- | 39.93 | 2328 | -- | -- |
| 30.47 | 0.258 | 2.91 | -- | -- | -- | -- | -- | 0.0508 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.22 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 3 | 26.23 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 6 | 26.31 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 9 | 26.44 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 10 | 26.55 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 11 | 26.60 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 16 | 27.09 | wind | 9.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 19 | 27.13 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 25 | 27.15 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 28 | 27.16 | humidity | 80.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 30 | 27.17 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 32 | 27.17 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 33 | 27.17 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 36 | 27.17 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 38 | 27.17 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 40 | 27.17 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 45 | 27.17 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 46 | 27.17 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 47 | 27.17 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 52 | 27.17 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 56 | 27.21 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 57 | 27.21 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 64 | 27.25 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 70 | 27.28 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 106 | 27.37 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 111 | 27.42 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 114 | 27.42 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 118 | 27.42 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 127 | 27.42 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 128 | 27.42 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 129 | 27.42 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 138 | 27.42 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 144 | 27.45 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 156 | 27.61 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 23 |
| 158 | 27.61 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 165 | 27.73 | wind | 1.0 | 270 | < th | dose dependent | rect. | 17 | 3 |
| 166 | 27.77 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 15 | 2 |
| 169 | 27.78 | wind | 1.0 | 270 | < th | dose independent | rect. | 17 | 3 |
| 175 | 27.82 | wind | 9.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 207 | 27.82 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 250 | 27.90 | wind | 1.0 | 4320 | < th | dose independent | rect. | 14 | 4 |
| 256 | 27.93 | wind | 1.0 | 4320 | > th | dose independent | rect. | 14 | 4 |
| 266 | 27.98 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 276 | 28.01 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 14 | 6 |
| 283 | 28.07 | wind | 1.0 | 4320 | < th | dose independent | rect. | 14 | 6 |
| 304 | 28.19 | wind | 1.0 | 4320 | > th | dose independent | rect. | 14 | 7 |
| 325 | 28.29 | wind | 9.0 | 4320 | < th | dose independent | rect. | 3 | 2 |
| 332 | 28.31 | wind | 1.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 344 | 28.34 | wind | 1.0 | 4320 | > th | dose independent | rect. | 14 | 9 |
| 345 | 28.35 | wind | 1.0 | 4320 | < th | dose independent | rect. | 14 | 9 |
| 346 | 28.35 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 353 | 28.38 | wind | 1.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 382 | 28.44 | wind | 9.0 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 404 | 28.46 | wind | 9.0 | 14400 | < th | dose independent | rect. | 3 | 8 |
| 422 | 28.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 427 | 28.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 440 | 28.49 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 12 |
| 442 | 28.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 452 | 28.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 460 | 28.51 | wind | 5.0 | 4320 | < th | dose independent | rect. | 3 | 2 |
| 474 | 28.52 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 495 | 28.54 | wind | 5.0 | 4320 | > th | dose independent | rect. | 3 | 3 |
| 503 | 28.54 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 12 |
| 528 | 28.56 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 561 | 28.59 | wind | 9.0 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 569 | 28.59 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 2 | 2 |
| 720 | 28.66 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 785 | 28.67 | wind | 9.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 819 | 28.67 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 915 | 28.68 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 7 | 7 |
| 928 | 28.68 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 9 | 12 |