Os02g0810900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NAC-domain containing protein 21/22 (ANAC021) (ANAC022). Splice isoform 2.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0810900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to NAC-domain containing protein 21/22 (ANAC021) (ANAC022). Splice isoform 2.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 369.72 | 0.903 | 7.38 | -2.11 | 1.34 | -1.01 | -0.439 | -2.6 | -0.926 | 11.8 | 997.6 | 11528 | -- | -- |
| 369.42 | 0.895 | 7.37 | -1.95 | 1.31 | -1.48 | -0.513 | -- | -1 | 11.7 | 1002 | 12305 | -- | -- |
| 370.56 | 0.897 | 7.38 | -2.12 | 1.34 | -1.01 | -- | -2.61 | -0.924 | 11.8 | 997.6 | 11528 | -- | -- |
| 369.88 | 0.896 | 7.37 | -2.02 | 1.34 | -1.59 | -- | -- | -1.02 | 11.9 | 1002 | 12280 | -- | -- |
| 481.9 | 1.02 | 7.41 | -2.18 | -- | -0.938 | -- | -2.91 | -0.929 | -- | 997.7 | 11076 | -- | -- |
| 429.69 | 0.972 | 7.32 | -2.28 | 1.32 | -- | -0.45 | -- | -0.813 | 11.8 | -- | -- | -- | -- |
| 430.57 | 0.972 | 7.32 | -2.3 | 1.32 | -- | -- | -- | -0.815 | 11.8 | -- | -- | -- | -- |
| 484.16 | 1.02 | 7.4 | -2.08 | -- | -1.52 | -- | -- | -1.04 | -- | 1002 | 12262 | -- | -- |
| 469.88 | 1.01 | 7.33 | -- | 1.37 | -1.94 | -- | -- | -0.841 | 11.8 | 1001 | 12563 | -- | -- |
| 540.73 | 1.09 | 7.35 | -2.33 | -- | -- | -- | -- | -0.832 | -- | -- | -- | -- | -- |
| 569.5 | 1.12 | 7.26 | -- | 1.35 | -- | -- | -- | -0.559 | 11.9 | -- | -- | -- | -- |
| 588.45 | 1.13 | 7.35 | -- | -- | -1.94 | -- | -- | -0.842 | -- | 1001 | 12356 | -- | -- |
| 684.53 | 1.22 | 7.29 | -- | -- | -- | -- | -- | -0.573 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 358.60 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 2 | 359.86 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 15 | 361.83 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 17 |
| 52 | 363.18 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 3 |
| 56 | 363.21 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 57 | 363.21 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 207 | 365.25 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 6 |
| 224 | 366.17 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 229 | 366.24 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 237 | 366.47 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 240 | 366.47 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 258 | 367.07 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 267 | 367.45 | wind | 9.0 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 275 | 367.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 282 | 367.78 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 298 | 368.11 | wind | 9.0 | 4320 | < th | dose independent | rect. | 19 | 6 |
| 306 | 368.35 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 3 | 12 |
| 314 | 368.49 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 12 |
| 330 | 368.71 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 332 | 368.73 | wind | 9.0 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 333 | 368.76 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 380 | 369.34 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 9 |
| 382 | 369.38 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 441 | 370.03 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 447 | 370.12 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 505 | 370.66 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 510 | 370.72 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 519 | 370.84 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 3 | 12 |
| 528 | 370.95 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 530 | 370.96 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 24 | 15 |
| 564 | 371.33 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 20 |
| 565 | 371.34 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 622 | 371.86 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 18 |
| 624 | 371.89 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 626 | 371.90 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 17 | 16 |
| 642 | 372.08 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 2 | NA |
| 656 | 372.21 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 658 | 372.21 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 6 |
| 659 | 372.23 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 22 | 12 |
| 674 | 372.28 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 678 | 372.29 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 733 | 372.42 | atmosphere | 1005.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 738 | 372.45 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 744 | 372.46 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 19 |
| 764 | 372.52 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 16 |
| 849 | 372.83 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 862 | 372.87 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 954 | 373.17 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 995 | 373.30 | atmosphere | 1005.0 | 14400 | < th | dose dependent | no | NA | NA |