Os02g0810400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dual specificity kinase 1.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0810400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Dual specificity kinase 1.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.17 | 0.189 | 13.1 | -0.321 | 0.884 | -0.245 | -0.299 | -1.98 | 0.322 | 1.12 | 24.89 | 278 | -- | -- |
| 17.41 | 0.196 | 13.1 | -0.0609 | 0.805 | -0.462 | -0.173 | -- | 0.397 | 1.39 | 24.89 | 278 | -- | -- |
| 16.49 | 0.189 | 13.1 | -0.29 | 0.89 | -0.251 | -- | -1.82 | 0.329 | 1.12 | 25 | 314 | -- | -- |
| 17.45 | 0.195 | 13.1 | -0.0502 | 0.835 | -0.449 | -- | -- | 0.403 | 1.13 | 24.4 | 156 | -- | -- |
| 44.01 | 0.309 | 13 | 0.115 | -- | -1.22 | -- | 0.162 | 0.52 | -- | 24.1 | 8 | -- | -- |
| 20.69 | 0.213 | 13.1 | -0.126 | 0.978 | -- | -0.0349 | -- | 0.358 | 1.67 | -- | -- | -- | -- |
| 20.69 | 0.213 | 13.1 | -0.125 | 0.978 | -- | -- | -- | 0.358 | 1.68 | -- | -- | -- | -- |
| 44.03 | 0.309 | 13 | 0.0926 | -- | -1.19 | -- | -- | 0.51 | -- | 24.1 | 8 | -- | -- |
| 17.47 | 0.195 | 13.1 | -- | 0.816 | -0.459 | -- | -- | 0.411 | 1.15 | 24.2 | 118 | -- | -- |
| 78.93 | 0.415 | 13.1 | -0.0855 | -- | -- | -- | -- | 0.38 | -- | -- | -- | -- | -- |
| 21.11 | 0.215 | 13.1 | -- | 0.975 | -- | -- | -- | 0.372 | 1.67 | -- | -- | -- | -- |
| 44.24 | 0.31 | 13 | -- | -- | -1.18 | -- | -- | 0.499 | -- | 24.1 | 8 | -- | -- |
| 79.13 | 0.415 | 13.1 | -- | -- | -- | -- | -- | 0.389 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.45 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 20 |
| 2 | 15.46 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 16 |
| 3 | 15.50 | temperature | 30 | 720 | < th | dose independent | sin | 5 | NA |
| 6 | 15.54 | temperature | 25 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 12 | 15.67 | temperature | 25 | 720 | > th | dose dependent | rect. | 24 | 15 |
| 24 | 15.73 | temperature | 30 | 720 | < th | dose independent | rect. | 19 | 21 |
| 26 | 15.74 | temperature | 30 | 720 | > th | dose independent | sin | 5 | NA |
| 27 | 15.74 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 8 |
| 41 | 15.74 | temperature | 25 | 720 | > th | dose dependent | sin | 5 | NA |
| 42 | 15.74 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 10 |
| 110 | 15.85 | temperature | 15 | 30 | > th | dose dependent | rect. | 6 | 14 |
| 114 | 15.87 | temperature | 30 | 720 | < th | dose independent | rect. | 21 | 19 |
| 116 | 15.88 | temperature | 30 | 270 | < th | dose independent | rect. | 23 | 22 |
| 146 | 15.95 | humidity | 60 | 720 | < th | dose independent | rect. | 11 | 4 |
| 152 | 15.96 | humidity | 60 | 720 | < th | dose independent | rect. | 12 | 1 |
| 205 | 16.01 | temperature | 30 | 270 | < th | dose independent | rect. | 1 | 18 |
| 217 | 16.03 | radiation | 30 | 720 | < th | dose independent | rect. | 1 | 10 |
| 257 | 16.07 | temperature | 15 | 90 | > th | dose dependent | sin | 22 | NA |
| 262 | 16.08 | temperature | 10 | 10 | > th | dose dependent | sin | 22 | NA |
| 340 | 16.18 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 350 | 16.18 | temperature | 25 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 351 | 16.18 | temperature | 25 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 368 | 16.19 | temperature | 25 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 383 | 16.21 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 6 |
| 401 | 16.21 | temperature | 25 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 420 | 16.24 | temperature | 30 | 720 | < th | dose independent | rect. | 1 | 11 |
| 480 | 16.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 497 | 16.30 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 524 | 16.31 | temperature | 30 | 270 | > th | dose independent | rect. | 15 | 23 |
| 533 | 16.32 | temperature | 30 | 270 | < th | dose independent | rect. | 9 | 10 |
| 552 | 16.33 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 4 |
| 568 | 16.33 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 23 |
| 588 | 16.35 | temperature | 30 | 270 | < th | dose independent | sin | 2 | NA |
| 592 | 16.35 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 8 |
| 726 | 16.43 | radiation | 30 | 720 | < th | dose independent | rect. | 17 | 18 |
| 932 | 16.52 | temperature | 30 | 720 | < th | dose independent | rect. | 13 | 23 |
| 969 | 16.54 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 1 |
| 984 | 16.55 | temperature | 30 | 720 | < th | dose independent | no | NA | NA |