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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0810200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.8 (0.0542) R2 : 0.12
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.04 (0.143) R2dE : 0.13 R2E : 0.118
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0828 (0.125) R2dN8 : 0.00139 R2N8 : -0.01
σ : 0.987
deviance : 449.23
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 23.62
memory length : 1630
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
439.56 0.985 3.84 -0.662 0.336 1.16 -0.156 -0.829 -0.245 9.5 23.7 1759 -- --
440.87 0.978 3.8 -0.35 0.374 1.15 -0.0351 -- -0.147 9.76 23.27 2011 -- --
439.65 0.977 3.84 -0.665 0.334 1.16 -- -0.822 -0.245 9.54 23.7 1755 -- --
440.58 0.978 3.8 -0.358 0.404 1.17 -- -- -0.149 10.2 23.29 2201 -- --
445.33 0.983 3.85 -0.627 -- 1.15 -- -0.744 -0.237 -- 23.66 1630 -- --
495.7 1.04 3.69 0.131 0.286 -- -0.0825 -- 0.355 9.57 -- -- -- --
495.72 1.04 3.69 0.128 0.286 -- -- -- 0.355 9.59 -- -- -- --
446.46 0.984 3.82 -0.342 -- 1.1 -- -- -0.15 -- 23.68 1630 -- --
443.64 0.981 3.79 -- 0.395 1.09 -- -- -0.0836 10.2 23.29 2190 -- --
500.57 1.05 3.7 0.126 -- -- -- -- 0.356 -- -- -- -- --
496.16 1.04 3.7 -- 0.286 -- -- -- 0.341 9.55 -- -- -- --
449.23 0.987 3.8 -- -- 1.04 -- -- -0.0828 -- 23.62 1630 -- --
500.99 1.04 3.71 -- -- -- -- -- 0.342 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 420.13 radiation 40 43200 < th dose independent rect. 22 10
2 420.14 radiation 40 43200 < th dose independent rect. 7 1
4 420.16 radiation 40 43200 < th dose independent rect. 1 7
5 420.17 radiation 40 43200 < th dose independent rect. 17 15
7 420.20 radiation 40 43200 < th dose independent rect. 19 13
17 420.67 radiation 30 43200 > th dose dependent rect. 7 1
45 421.62 temperature 15 43200 > th dose independent rect. 23 2
58 422.59 radiation 1 43200 > th dose independent rect. 9 2
65 422.89 radiation 1 43200 < th dose independent rect. 9 2
68 422.93 temperature 15 43200 > th dose independent rect. 23 6
70 423.16 temperature 15 43200 < th dose independent rect. 23 2
96 423.52 temperature 20 43200 < th dose independent rect. 14 1
100 423.62 temperature 20 43200 > th dose independent rect. 14 1
112 423.86 temperature 15 43200 < th dose independent rect. 23 6
151 424.14 radiation 1 43200 < th dose dependent rect. 9 2
166 424.35 radiation 1 43200 < th dose dependent rect. 8 4
167 424.37 temperature 15 43200 > th dose independent rect. 23 13
228 424.86 temperature 15 43200 > th dose independent sin 9 NA
240 424.96 radiation 40 43200 < th dose independent rect. 15 5
246 425.00 radiation 20 43200 < th dose independent rect. 17 3
248 425.00 radiation 40 43200 < th dose independent rect. 15 12
250 425.01 radiation 40 43200 < th dose independent rect. 15 14
256 425.03 radiation 40 43200 < th dose independent rect. 15 9
260 425.04 radiation 1 43200 > th dose dependent rect. 4 2
287 425.15 radiation 10 43200 < th dose independent rect. 17 9
290 425.16 radiation 10 43200 < th dose independent rect. 17 7
310 425.24 temperature 15 43200 > th dose independent rect. 9 1
327 425.32 radiation 40 43200 < th dose dependent rect. 1 4
369 425.69 temperature 20 43200 < th dose dependent rect. 10 9
370 425.72 temperature 20 43200 < th dose dependent rect. 11 4
375 425.73 humidity 90 43200 > th dose dependent rect. 23 1
377 425.74 temperature 20 43200 < th dose dependent rect. 10 7
388 425.83 temperature 20 43200 < th dose dependent rect. 14 1
391 425.86 temperature 20 43200 < th dose dependent rect. 11 1
425 426.08 temperature 15 43200 < th dose independent rect. 23 13
429 426.11 temperature 20 43200 < th dose dependent rect. 13 6
448 426.23 humidity 90 43200 > th dose dependent rect. 13 15
468 426.34 temperature 20 43200 < th dose dependent rect. 16 3
493 426.47 temperature 20 43200 < th dose dependent rect. 18 1
502 426.51 radiation 40 43200 < th dose dependent rect. 22 8
512 426.55 temperature 15 43200 < th dose independent sin 9 NA
518 426.56 radiation 20 43200 > th dose independent rect. 17 14
519 426.56 radiation 40 43200 < th dose dependent rect. 19 11
551 426.65 radiation 20 43200 < th dose dependent rect. 4 2
564 426.68 radiation 20 43200 > th dose independent rect. 6 1
661 426.98 temperature 15 43200 > th dose independent rect. 9 21
696 427.15 radiation 1 43200 > th dose independent rect. 4 1
732 427.21 humidity 90 43200 > th dose dependent rect. 21 6
775 427.37 temperature 25 14400 < th dose independent rect. 7 2
812 427.50 temperature 15 43200 < th dose independent rect. 4 1
819 427.54 temperature 15 43200 < th dose independent rect. 9 1
853 427.64 temperature 25 14400 > th dose independent rect. 7 2
906 427.81 temperature 15 43200 < th dose independent rect. 9 3
916 427.84 temperature 30 14400 < th dose independent rect. 12 3
944 427.90 temperature 20 14400 > th dose dependent rect. 4 1
960 427.95 humidity 90 43200 > th dose independent rect. 13 15
966 427.97 temperature 15 43200 > th dose independent no NA NA
975 428.00 humidity 90 43200 > th dose dependent sin 14 NA
977 428.01 temperature 20 43200 < th dose dependent sin 21 NA
991 428.07 temperature 25 14400 > th dose dependent rect. 19 19