Os02g0808500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0808500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.98 | 0.361 | 9.58 | -0.167 | 2.12 | -0.491 | -0.0663 | 0.801 | -0.395 | 2.77 | 24.7 | 4167 | -- | -- |
| 59.28 | 0.359 | 9.55 | 0.0691 | 2.13 | -0.446 | -0.0944 | -- | -0.316 | 2.81 | 25.51 | 3834 | -- | -- |
| 59 | 0.358 | 9.58 | -0.168 | 2.12 | -0.491 | -- | 0.812 | -0.395 | 2.77 | 24.7 | 4166 | -- | -- |
| 59.32 | 0.359 | 9.55 | 0.0739 | 2.12 | -0.443 | -- | -- | -0.317 | 2.82 | 25.53 | 3826 | -- | -- |
| 271.83 | 0.772 | 9.43 | 0.463 | -- | 0.824 | -- | 0.319 | 0.214 | -- | 24.7 | 4166 | -- | -- |
| 64.61 | 0.377 | 9.53 | 0.231 | 2.17 | -- | -0.0918 | -- | -0.227 | 2.74 | -- | -- | -- | -- |
| 64.64 | 0.376 | 9.53 | 0.233 | 2.17 | -- | -- | -- | -0.227 | 2.74 | -- | -- | -- | -- |
| 226.64 | 0.704 | 9.45 | 0.561 | -- | 1.05 | -- | -- | 0.151 | -- | 26.2 | 3892 | -- | -- |
| 59.44 | 0.359 | 9.55 | -- | 2.12 | -0.466 | -- | -- | -0.33 | 2.82 | 25.52 | 3826 | -- | -- |
| 337.44 | 0.858 | 9.52 | 0.326 | -- | -- | -- | -- | -0.172 | -- | -- | -- | -- | -- |
| 66.07 | 0.38 | 9.54 | -- | 2.17 | -- | -- | -- | -0.253 | 2.74 | -- | -- | -- | -- |
| 234.82 | 0.716 | 9.46 | -- | -- | 1.01 | -- | -- | 0.0796 | -- | 26.2 | 3892 | -- | -- |
| 340.23 | 0.861 | 9.53 | -- | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.79 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 2 | 52.06 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 23 | 6 |
| 7 | 52.64 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 2 | 3 |
| 27 | 53.69 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 3 |
| 32 | 53.82 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 19 | 13 |
| 36 | 53.94 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 21 | 3 |
| 47 | 54.13 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 4 |
| 71 | 54.55 | temperature | 25.0 | 270 | < th | dose independent | rect. | 5 | 3 |
| 88 | 54.96 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 3 |
| 100 | 55.14 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 103 | 55.18 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 5 |
| 113 | 55.28 | temperature | 25.0 | 720 | < th | dose independent | rect. | 20 | 12 |
| 116 | 55.30 | humidity | 80.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 118 | 55.33 | temperature | 15.0 | 270 | > th | dose independent | rect. | 8 | 21 |
| 119 | 55.34 | humidity | 80.0 | 270 | > th | dose independent | rect. | 24 | 4 |
| 148 | 55.63 | temperature | 25.0 | 270 | < th | dose independent | rect. | 6 | 1 |
| 150 | 55.63 | wind | 3.0 | 270 | < th | dose dependent | rect. | 2 | 1 |
| 164 | 55.73 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 21 |
| 166 | 55.74 | wind | 3.0 | 90 | < th | dose independent | rect. | 2 | 3 |
| 176 | 55.80 | temperature | 20.0 | 90 | > th | dose independent | rect. | 10 | 19 |
| 181 | 55.81 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 186 | 55.84 | temperature | 25.0 | 720 | < th | dose independent | rect. | 20 | 5 |
| 191 | 55.87 | temperature | 15.0 | 270 | > th | dose independent | rect. | 8 | 11 |
| 195 | 55.89 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 21 |
| 197 | 55.90 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 4 |
| 211 | 55.96 | wind | 9.0 | 30 | < th | dose independent | rect. | 2 | 3 |
| 212 | 55.96 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 3 |
| 214 | 55.96 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 3 |
| 215 | 55.96 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 3 |
| 218 | 55.96 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 3 |
| 219 | 55.96 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 3 |
| 221 | 55.96 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 3 |
| 226 | 55.96 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 21 |
| 231 | 55.96 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 14 | 15 |
| 234 | 55.97 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 3 |
| 239 | 55.97 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 21 |
| 241 | 55.97 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 3 |
| 243 | 55.97 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 274 | 56.02 | temperature | 15.0 | 270 | > th | dose independent | rect. | 15 | 13 |
| 278 | 56.03 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 19 | 13 |
| 305 | 56.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 22 |
| 330 | 56.12 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 3 |
| 355 | 56.14 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 21 |
| 363 | 56.16 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 21 |
| 368 | 56.17 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 22 |
| 393 | 56.22 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 3 |
| 395 | 56.24 | temperature | 25.0 | 720 | < th | dose independent | rect. | 22 | 1 |
| 397 | 56.24 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 11 |
| 398 | 56.24 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 13 |
| 400 | 56.24 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 13 |
| 406 | 56.24 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 14 |
| 409 | 56.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 4 |
| 413 | 56.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 4 |
| 415 | 56.26 | wind | 7.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 424 | 56.27 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 427 | 56.28 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 430 | 56.28 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 431 | 56.28 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 4 |
| 434 | 56.28 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 4 |
| 436 | 56.28 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 445 | 56.28 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 4 |
| 452 | 56.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 13 |
| 453 | 56.29 | radiation | 40.0 | 270 | < th | dose independent | rect. | 19 | 13 |
| 457 | 56.30 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 4 |
| 470 | 56.33 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 14 |
| 479 | 56.35 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 5 | 9 |
| 510 | 56.36 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 11 |
| 569 | 56.43 | temperature | 25.0 | 720 | > th | dose independent | rect. | 17 | 15 |
| 576 | 56.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 22 |
| 584 | 56.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 592 | 56.48 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 598 | 56.50 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 22 | 6 |
| 604 | 56.51 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 3 |
| 624 | 56.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 11 |
| 625 | 56.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 13 |
| 628 | 56.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 11 |
| 629 | 56.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 13 |
| 633 | 56.55 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 5 | 4 |
| 660 | 56.59 | temperature | 25.0 | 720 | > th | dose independent | sin | 11 | NA |
| 662 | 56.59 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 22 | 4 |
| 708 | 56.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 11 |
| 723 | 56.72 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 757 | 56.78 | wind | 1.0 | 90 | > th | dose independent | rect. | 2 | 3 |
| 767 | 56.79 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 774 | 56.80 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 21 |
| 780 | 56.81 | temperature | 25.0 | 720 | > th | dose independent | rect. | 17 | 12 |
| 789 | 56.82 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 803 | 56.83 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 11 |
| 825 | 56.86 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 830 | 56.87 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 839 | 56.87 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 5 |
| 855 | 56.88 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 5 | 3 |
| 858 | 56.88 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 11 |
| 876 | 56.90 | temperature | 25.0 | 720 | < th | dose independent | sin | 11 | NA |
| 920 | 56.94 | temperature | 15.0 | 90 | > th | dose independent | rect. | 10 | 10 |
| 944 | 56.96 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 14 |
| 948 | 56.96 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 3 |
| 987 | 56.98 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 11 |
| 988 | 56.98 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 11 |