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Os02g0807800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.14 (0.0559) R2 : 0.268
β1 : 1.63 (0.221) R2dD : 0.109 R2D : -0.0186
β2 : 0.956 (0.137) R2dC : 0.0771 R2C : 0.0816
β3 : -2.26 (0.233) R2dE : 0.184 R2E : 0.0583
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.497 (0.123) R2dN8 : 0.0389 R2N8 : -0.0193
σ : 1.04
deviance : 495.49
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C
peak time of C : 2.78
E
wheather : wind
threshold : 6.979
memory length : 4331
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 17
open length of G : 2.97

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
489.93 1.04 7.13 1.5 0.938 -1.73 -0.903 2.2 0.486 2.7 6.996 4331 17.1 3.02
492.85 1.03 7.14 1.68 0.919 -2.24 -0.751 -- 0.504 2.45 6.979 4331 17 2.97
492.46 1.03 7.13 1.51 0.921 -1.75 -- 2.46 0.486 2.75 7 4335 17.1 3.05
495.49 1.04 7.14 1.63 0.956 -2.26 -- -- 0.497 2.78 6.979 4331 17 2.97
534.58 1.08 7.15 1.6 -- -2.19 -- 2.86 0.532 -- 6.9 4347 17.3 2.58
587.85 1.14 7.25 0.759 1.05 -- -1.48 -- 0.147 2.97 -- -- -- --
594.98 1.14 7.24 0.792 1.06 -- -- -- 0.155 3.2 -- -- -- --
539.45 1.08 7.15 1.7 -- -2.45 -- -- 0.594 -- 6.999 4339 17.3 2.61
552.35 1.09 7.14 -- 0.946 -1.8 -- -- 0.497 2.82 6.988 4333 17.3 2.82
658.24 1.2 7.24 0.837 -- -- -- -- 0.183 -- -- -- -- --
611.5 1.16 7.26 -- 1.07 -- -- -- 0.0671 3.2 -- -- -- --
600.52 1.14 7.14 -- -- -1.88 -- -- 0.383 -- 7.102 4341 17.3 2.9
676.7 1.21 7.26 -- -- -- -- -- 0.0901 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 492.31 wind 7 4320 < th dose independent rect. 17 3
3 493.19 wind 7 4320 > th dose independent rect. 17 3
4 493.32 wind 7 4320 > th dose independent rect. 17 1
7 495.30 wind 7 4320 < th dose independent rect. 17 1
10 497.39 wind 7 4320 > th dose independent rect. 15 7
11 497.42 wind 7 4320 < th dose independent rect. 15 7
25 499.53 wind 5 4320 > th dose dependent rect. 17 5
28 499.78 wind 7 4320 > th dose dependent rect. 17 3
32 500.38 wind 7 4320 > th dose dependent rect. 17 1
57 503.11 wind 7 4320 > th dose independent rect. 15 16
61 503.21 wind 7 43200 < th dose independent rect. 17 1
71 503.90 wind 7 4320 < th dose independent rect. 15 15
100 505.70 wind 7 43200 > th dose independent rect. 17 1
118 506.29 wind 9 43200 > th dose independent rect. 14 6
131 506.78 wind 7 720 > th dose independent rect. 16 12
154 507.34 wind 9 43200 < th dose independent rect. 14 6
157 507.39 wind 7 720 > th dose independent rect. 16 8
167 507.99 wind 9 43200 > th dose independent rect. 14 8
171 508.18 wind 7 4320 < th dose independent sin 15 NA
172 508.31 wind 7 4320 > th dose independent sin 15 NA
187 508.83 wind 7 720 < th dose independent rect. 17 8
191 509.03 wind 9 43200 < th dose independent rect. 14 8
235 510.23 wind 9 43200 > th dose dependent rect. 14 6
238 510.25 wind 5 720 > th dose dependent rect. 17 6
243 510.35 wind 7 4320 > th dose dependent rect. 15 16
248 510.52 wind 7 720 < th dose independent rect. 15 18
271 511.01 wind 7 720 < th dose independent rect. 17 16
274 511.08 wind 7 720 < th dose independent rect. 15 16
303 512.18 wind 9 43200 > th dose dependent rect. 14 8
311 512.30 wind 7 43200 > th dose dependent rect. 15 2
314 512.41 wind 5 720 > th dose dependent rect. 16 11
342 512.84 wind 5 720 > th dose independent rect. 21 1
344 512.91 wind 7 720 > th dose independent sin 13 NA
386 513.70 wind 7 720 < th dose independent sin 13 NA
415 514.09 wind 9 43200 < th dose independent rect. 14 11
421 514.19 wind 9 43200 < th dose independent rect. 11 11
428 514.37 wind 7 720 > th dose independent rect. 17 1
433 514.41 wind 9 43200 > th dose independent rect. 14 11
438 514.51 wind 5 4320 > th dose dependent sin 14 NA
454 514.78 wind 9 43200 > th dose independent rect. 11 11
457 514.82 wind 7 43200 > th dose dependent rect. 19 1
470 515.13 wind 9 43200 < th dose independent rect. 11 9
479 515.29 humidity 90 720 > th dose dependent rect. 20 1
483 515.36 humidity 50 720 > th dose dependent rect. 16 7
484 515.37 wind 9 43200 < th dose independent rect. 12 6
502 515.78 radiation 1 1440 < th dose dependent rect. 8 9
511 515.92 wind 9 43200 > th dose independent rect. 12 8
516 515.94 wind 5 4320 < th dose independent rect. 21 1
542 516.25 wind 7 43200 > th dose independent rect. 17 3
618 517.07 radiation 1 720 < th dose independent sin 20 NA
624 517.15 wind 5 720 > th dose dependent sin 14 NA
641 517.48 wind 7 43200 > th dose independent rect. 19 1
644 517.54 wind 7 43200 < th dose independent rect. 17 3
647 517.57 wind 9 43200 < th dose independent rect. 12 1
653 517.74 atmosphere 1005 720 > th dose independent rect. 21 4
663 517.90 wind 5 4320 > th dose independent rect. 21 1
664 517.90 radiation 1 720 < th dose dependent sin 21 NA
682 518.10 wind 9 43200 > th dose dependent rect. 11 11
687 518.20 wind 9 43200 < th dose independent rect. 11 15
716 518.70 wind 7 43200 > th dose dependent rect. 12 1
720 518.77 wind 7 43200 > th dose dependent rect. 11 7
722 518.78 humidity 90 720 > th dose dependent rect. 20 3
733 518.94 temperature 25 720 > th dose dependent rect. 15 14
773 519.34 wind 7 43200 < th dose independent rect. 19 1
812 519.71 radiation 1 720 < th dose independent rect. 14 9
822 519.80 wind 7 43200 > th dose dependent rect. 16 7
825 519.82 wind 7 720 < th dose independent rect. 15 12
850 520.13 temperature 25 720 > th dose dependent sin 13 NA
878 520.46 wind 7 43200 > th dose independent rect. 16 14
884 520.50 humidity 90 720 < th dose dependent rect. 15 9
888 520.52 wind 7 43200 < th dose independent rect. 17 13
897 520.62 wind 7 43200 < th dose independent rect. 17 6
910 520.75 wind 5 720 > th dose dependent rect. 17 2
932 521.02 wind 7 43200 > th dose independent rect. 16 7
973 521.44 wind 7 43200 > th dose dependent rect. 11 15
993 521.63 wind 7 43200 > th dose dependent rect. 14 12
1000 521.69 wind 3 720 > th dose dependent rect. 21 1