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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0807200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Disintegrin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.56 (0.0515) R2 : 0.112
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.93 (0.437) R2dE : 0.104 R2E : 0.104
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.173 (0.108) R2dN8 : 0.00804 R2N8 : 0.00826
σ : 0.96
deviance : 422.05
__
_____
C
peak time of C : --
E
wheather : humidity
threshold : 77.03
memory length : 11
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 5.35
open length of G : 3.5

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
396.89 0.928 3.55 0.484 0.428 3.47 -0.19 -4.16 -0.109 0.22 80 10 5 3
403.76 0.936 3.55 0.484 0.428 3.47 -0.117 -- -0.109 0.149 80 10 5 3
395.91 0.934 3.56 0.446 0.426 5.59 -- -9.13 -0.11 0.252 80 10 5 3
403.79 0.942 3.55 0.504 0.422 2.98 -- -- -0.121 0.424 77.03 11 5.35 3.5
407.29 0.945 3.55 0.462 -- 5.46 -- -9.02 -0.105 -- 80 10 5 3
462.87 1.01 3.56 0.512 0.416 -- -0.158 -- -0.182 2.08 -- -- -- --
462.97 1.01 3.56 0.517 0.416 -- -- -- -0.181 2.1 -- -- -- --
414.96 0.953 3.54 0.519 -- 2.92 -- -- -0.116 -- 77.03 11 5.35 3.5
410.22 0.943 3.56 -- 0.43 2.99 -- -- -0.169 0.0817 79.01 9 5.27 3.6
473.32 1.02 3.56 0.534 -- -- -- -- -0.171 -- -- -- -- --
470 1.01 3.57 -- 0.426 -- -- -- -0.238 2.13 -- -- -- --
422.05 0.96 3.56 -- -- 2.93 -- -- -0.173 -- 77.03 11 5.35 3.5
480.84 1.02 3.57 -- -- -- -- -- -0.23 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 396.89 humidity 80.0 10 < th dose independent rect. 5 3
8 406.01 atmosphere 1005.0 10 > th dose dependent rect. 7 1
11 409.90 humidity 90.0 90 < th dose dependent rect. 4 4
15 411.15 radiation 10.0 10 > th dose independent rect. 6 2
33 412.93 humidity 80.0 90 < th dose dependent rect. 5 2
38 413.68 humidity 90.0 10 < th dose dependent rect. 4 4
43 414.74 humidity 80.0 10 < th dose independent rect. 22 10
54 419.20 humidity 90.0 10 < th dose dependent rect. 2 6
56 419.53 atmosphere 1005.0 10 > th dose independent rect. 7 1
80 422.22 humidity 90.0 10 < th dose dependent rect. 7 1
94 423.98 radiation 1.0 10 > th dose dependent rect. 17 15
95 424.16 humidity 80.0 10 < th dose dependent rect. 19 13
97 424.60 humidity 60.0 90 > th dose independent rect. 16 16
107 425.41 radiation 1.0 10 > th dose dependent rect. 5 3
118 425.43 precipitation 0.1 90 < th dose independent rect. 8 21
119 425.43 precipitation 0.1 90 < th dose dependent rect. 8 21
140 426.31 temperature 30.0 270 < th dose dependent rect. 3 4
157 426.61 wind 3.0 10 < th dose independent rect. 7 1
158 426.61 temperature 30.0 30 < th dose independent rect. 16 17
160 426.77 humidity 80.0 30 < th dose independent rect. 19 13
161 426.78 wind 9.0 270 < th dose dependent rect. 18 9
167 426.97 wind 5.0 10 < th dose dependent rect. 7 1
168 427.05 precipitation 0.1 90 < th dose independent rect. 8 23
169 427.05 precipitation 0.1 90 < th dose dependent rect. 8 23
185 427.14 temperature 10.0 43200 > th dose independent rect. 9 8
186 427.17 radiation 30.0 90 > th dose dependent rect. 7 1
203 427.20 radiation 10.0 90 > th dose dependent rect. 6 1
222 427.52 radiation 30.0 10 > th dose dependent rect. 7 1
256 427.57 temperature 30.0 90 < th dose dependent rect. 5 3
257 427.60 wind 1.0 90 < th dose independent rect. 7 1
259 427.68 radiation 1.0 10 > th dose dependent rect. 7 1
267 427.88 atmosphere 995.0 90 > th dose independent rect. 16 16
278 428.21 wind 1.0 10 > th dose independent rect. 16 17
333 428.96 radiation 20.0 30 < th dose independent rect. 7 1
334 428.96 wind 5.0 90 < th dose independent rect. 5 3
349 429.44 precipitation 0.1 90 < th dose independent rect. 8 8
350 429.44 precipitation 0.1 90 < th dose dependent rect. 8 8
354 429.49 temperature 15.0 90 > th dose independent rect. 16 16
373 429.87 temperature 10.0 90 > th dose independent rect. 8 8
374 429.87 atmosphere 1015.0 90 < th dose independent rect. 8 8
376 429.88 atmosphere 995.0 10 > th dose independent rect. 17 16
393 430.09 precipitation 0.1 90 < th dose independent rect. 5 3
396 430.09 precipitation 0.1 90 < th dose dependent rect. 5 3
399 430.18 temperature 10.0 90 > th dose independent rect. 5 3
401 430.18 temperature 30.0 90 < th dose independent rect. 5 3
402 430.18 humidity 50.0 90 > th dose independent rect. 5 3
404 430.18 atmosphere 995.0 90 > th dose independent rect. 5 3
405 430.18 atmosphere 1015.0 90 < th dose independent rect. 5 3
406 430.18 wind 9.0 90 < th dose independent rect. 8 8
408 430.18 temperature 10.0 90 > th dose independent rect. 8 21
412 430.23 wind 9.0 90 < th dose independent rect. 8 21
413 430.25 wind 9.0 90 < th dose independent rect. 16 16
422 430.35 radiation 30.0 90 > th dose independent rect. 7 1
441 430.43 radiation 40.0 90 < th dose independent rect. 16 16
460 430.60 radiation 40.0 90 < th dose independent rect. 5 3
463 430.72 wind 5.0 270 < th dose independent rect. 3 5
464 430.73 radiation 30.0 10 > th dose independent rect. 7 1
481 430.76 wind 9.0 1440 < th dose independent rect. 6 3
482 430.76 temperature 10.0 1440 > th dose independent rect. 6 3
485 430.76 humidity 50.0 1440 > th dose independent rect. 6 3
487 430.76 atmosphere 995.0 1440 > th dose independent rect. 6 3
488 430.76 atmosphere 1015.0 1440 < th dose independent rect. 6 3
489 430.76 temperature 10.0 1440 > th dose independent rect. 9 21
537 431.06 temperature 10.0 1440 > th dose independent rect. 9 8
540 431.06 temperature 10.0 1440 > th dose independent rect. 17 16
573 431.14 precipitation 0.1 10 < th dose independent rect. 7 1
574 431.14 precipitation 0.1 10 < th dose dependent rect. 7 1
612 431.31 temperature 10.0 10 > th dose independent rect. 7 1
614 431.31 temperature 30.0 10 < th dose independent rect. 7 1
615 431.31 humidity 50.0 10 > th dose independent rect. 7 1
617 431.31 atmosphere 995.0 10 > th dose independent rect. 7 1
618 431.31 atmosphere 1015.0 10 < th dose independent rect. 7 1
619 431.31 temperature 10.0 10 > th dose independent rect. 8 23
620 431.32 wind 1.0 10 > th dose independent rect. 5 4
623 431.33 temperature 15.0 10 > th dose independent rect. 17 16
630 431.38 wind 9.0 10 < th dose independent rect. 8 23
632 431.43 wind 7.0 270 < th dose independent rect. 8 19
679 431.66 radiation 1.0 90 > th dose independent rect. 8 8
701 431.85 temperature 10.0 10 > th dose independent rect. 9 8
703 431.85 atmosphere 1015.0 10 < th dose independent rect. 9 8
704 431.85 precipitation 0.1 10 < th dose independent rect. 9 8
706 431.85 precipitation 0.1 10 < th dose dependent rect. 9 8
713 431.91 wind 9.0 90 < th dose dependent rect. 8 21
717 431.97 wind 5.0 270 < th dose independent rect. 18 9
720 432.00 atmosphere 1010.0 270 < th dose independent rect. 3 5
724 432.08 wind 9.0 10 < th dose independent rect. 9 8
735 432.15 wind 9.0 1440 < th dose independent rect. 8 1
738 432.15 temperature 10.0 1440 > th dose independent rect. 8 1
743 432.15 humidity 50.0 1440 > th dose independent rect. 8 1
745 432.15 atmosphere 995.0 1440 > th dose independent rect. 8 1
748 432.15 atmosphere 1015.0 1440 < th dose independent rect. 8 1
749 432.15 temperature 10.0 1440 > th dose independent rect. 9 23
754 432.19 wind 9.0 10 < th dose independent rect. 17 16
780 432.33 atmosphere 995.0 90 > th dose independent rect. 8 8
783 432.38 precipitation 0.1 270 < th dose independent rect. 6 23
784 432.38 precipitation 0.1 270 < th dose dependent rect. 6 23
812 432.72 temperature 10.0 10 > th dose dependent rect. 7 1
820 432.75 wind 1.0 10 > th dose independent rect. 7 1
825 432.78 wind 5.0 270 < th dose independent rect. 20 7
832 432.83 precipitation 0.1 270 < th dose independent rect. 3 5
833 432.83 precipitation 0.1 270 < th dose dependent rect. 3 5
845 432.86 wind 9.0 270 < th dose dependent rect. 3 5
847 432.87 temperature 10.0 270 > th dose independent rect. 3 5
849 432.87 temperature 30.0 270 < th dose independent rect. 3 5
850 432.87 humidity 50.0 270 > th dose independent rect. 3 5
852 432.87 atmosphere 995.0 270 > th dose independent rect. 3 5
894 433.09 wind 1.0 90 > th dose independent rect. 8 8
909 433.21 radiation 40.0 270 < th dose independent rect. 3 5
912 433.25 wind 5.0 90 < th dose independent rect. 20 9
940 433.35 radiation 40.0 30 < th dose dependent rect. 7 1
943 433.37 radiation 40.0 10 < th dose independent rect. 17 16
953 433.43 humidity 80.0 10 < th dose dependent sin 11 NA