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Os02g0806400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0278) R2 : 0.436
β1 : 0.963 (0.105) R2dD : 0.118 R2D : 0.0466
β2 : 1.29 (0.0785) R2dC : 0.412 R2C : 0.174
β3 : 1.39 (0.126) R2dE : 0.217 R2E : -0.079
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0704 (0.0638) R2dN8 : 0.00236 R2N8 : -0.0191
σ : 0.511
deviance : 120.38
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C
peak time of C : 17.1
E
wheather : temperature
threshold : 29.2
memory length : 33
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
110.77 0.494 10.3 0.505 1.3 1.45 0.754 2.72 -0.0398 17 28.42 27 -- --
120.39 0.511 10.3 0.969 1.29 1.4 0.0229 -- 0.0768 17 29.17 33 -- --
111.98 0.493 10.3 0.557 1.28 1.43 -- 2.39 -0.0234 17 28.24 24 -- --
120.38 0.511 10.3 0.963 1.29 1.39 -- -- 0.0704 17.1 29.2 33 -- --
180 0.628 10.3 0.423 -- 0.837 -- 2.19 -0.177 -- 24.97 27 -- --
146.55 0.568 10.3 0.623 0.979 -- 0.368 -- -0.218 18.3 -- -- -- --
146.84 0.567 10.3 0.62 0.982 -- -- -- -0.216 18.2 -- -- -- --
188.6 0.642 10.3 0.746 -- 0.68 -- -- -0.104 -- 25.2 16 -- --
142.19 0.558 10.3 -- 1.16 0.975 -- -- -0.115 17.3 29.2 33 -- --
196.81 0.656 10.3 0.593 -- -- -- -- -0.238 -- -- -- -- --
156.96 0.586 10.4 -- 0.973 -- -- -- -0.286 18.2 -- -- -- --
202.21 0.664 10.3 -- -- 0.447 -- -- -0.225 -- 25.4 3 -- --
206.08 0.67 10.3 -- -- -- -- -- -0.304 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 109.02 temperature 20 30 > th dose dependent sin 6 NA
5 110.04 temperature 30 30 < th dose dependent rect. 7 23
7 110.51 temperature 30 90 < th dose dependent rect. 23 20
10 110.82 temperature 20 10 > th dose dependent rect. 19 17
11 110.83 temperature 15 10 > th dose dependent rect. 6 16
14 110.92 temperature 30 30 < th dose dependent rect. 9 23
20 111.32 temperature 30 90 < th dose dependent rect. 21 22
23 111.51 temperature 15 10 > th dose dependent rect. 6 18
24 111.52 temperature 20 10 > th dose dependent rect. 6 20
26 111.60 temperature 10 270 > th dose dependent rect. 5 17
31 111.86 temperature 30 30 < th dose dependent rect. 11 23
33 111.97 temperature 30 30 < th dose dependent no NA NA
35 112.03 temperature 30 10 < th dose dependent rect. 13 23
36 112.03 temperature 30 30 < th dose dependent rect. 17 23
40 112.12 temperature 20 270 > th dose dependent rect. 17 18
45 112.21 temperature 10 270 > th dose dependent rect. 3 22
47 112.24 temperature 25 90 < th dose independent rect. 23 20
50 112.27 temperature 30 270 < th dose dependent rect. 9 21
51 112.27 temperature 30 30 < th dose dependent rect. 15 23
54 112.36 temperature 20 270 > th dose dependent rect. 16 20
55 112.36 temperature 20 10 > th dose dependent rect. 19 23
60 112.56 temperature 30 10 < th dose dependent rect. 21 23
62 112.62 temperature 30 90 < th dose dependent rect. 23 22
63 112.64 temperature 30 10 < th dose dependent rect. 1 23
71 112.76 temperature 25 90 < th dose independent rect. 23 18
99 113.24 temperature 30 30 < th dose dependent sin 5 NA
114 113.41 temperature 25 90 < th dose independent rect. 21 22
120 113.53 temperature 25 90 < th dose independent rect. 23 22
131 113.61 temperature 20 10 > th dose dependent rect. 23 23
132 113.62 temperature 25 90 > th dose independent rect. 23 23
133 113.62 temperature 20 270 > th dose dependent rect. 3 7
148 113.76 temperature 25 90 < th dose independent rect. 7 23
157 113.86 temperature 20 10 > th dose dependent rect. 13 23
183 114.13 temperature 30 30 < th dose dependent rect. 3 23
208 114.38 temperature 20 10 > th dose dependent rect. 15 23
209 114.39 temperature 20 10 > th dose dependent rect. 19 19
218 114.46 temperature 25 90 < th dose independent rect. 9 23
229 114.52 temperature 10 10 > th dose dependent no NA NA
234 114.54 temperature 20 10 > th dose dependent rect. 3 23
238 114.61 temperature 25 90 > th dose independent rect. 13 23
248 114.71 temperature 25 90 < th dose independent rect. 11 22
269 114.88 temperature 25 90 < th dose independent no NA NA
306 115.09 temperature 25 30 < th dose independent rect. 13 23
307 115.09 temperature 25 90 < th dose independent rect. 17 23
311 115.11 temperature 25 30 > th dose independent rect. 19 23
312 115.11 temperature 25 30 < th dose independent rect. 1 23
318 115.13 temperature 25 30 > th dose independent rect. 1 21
327 115.14 temperature 20 10 > th dose dependent rect. 1 23
344 115.24 temperature 25 30 > th dose independent sin 5 NA
351 115.27 temperature 25 90 > th dose independent rect. 1 23
352 115.27 temperature 25 30 < th dose independent rect. 15 23
400 115.58 temperature 25 90 > th dose independent rect. 3 23
413 115.64 temperature 20 10 > th dose dependent rect. 21 23
427 115.69 temperature 25 90 > th dose independent no NA NA
430 115.70 temperature 25 90 > th dose independent rect. 15 23
444 115.81 temperature 25 30 < th dose independent rect. 3 23
463 115.90 temperature 10 720 > th dose dependent rect. 21 14
490 116.05 temperature 25 10 > th dose independent rect. 6 23
499 116.09 temperature 10 720 > th dose dependent rect. 23 8
502 116.11 temperature 20 10 > th dose dependent rect. 21 15
511 116.15 temperature 10 720 > th dose dependent sin 7 NA
519 116.19 temperature 25 270 > th dose independent rect. 15 21
571 116.52 temperature 15 720 > th dose dependent rect. 23 10
584 116.57 temperature 25 30 < th dose independent sin 5 NA
681 116.94 temperature 25 30 > th dose independent rect. 21 23
699 116.99 temperature 30 90 < th dose dependent rect. 1 16
765 117.25 temperature 25 10 > th dose independent rect. 19 17
781 117.31 temperature 20 10 > th dose dependent rect. 23 13
827 117.49 temperature 10 720 > th dose dependent rect. 23 16
860 117.63 temperature 25 90 > th dose independent rect. 8 23
901 117.77 temperature 30 720 < th dose dependent rect. 1 7
908 117.83 temperature 25 90 < th dose independent rect. 1 16
919 117.90 temperature 30 10 < th dose dependent rect. 24 16
938 117.97 temperature 30 720 < th dose dependent sin 7 NA
961 118.03 temperature 25 10 > th dose independent rect. 1 11
981 118.10 temperature 30 720 < th dose dependent rect. 23 9