Os02g0805700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0805700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.08 | 0.216 | 10.8 | 0.348 | 0.725 | -0.269 | 0.0779 | 3.56 | 0.206 | 21.8 | 29.5 | 3733 | -- | -- |
| 22.44 | 0.222 | 10.7 | 1.01 | 0.72 | 0.111 | 0.00744 | -- | 0.316 | 21.5 | 29.5 | 3733 | -- | -- |
| 21.09 | 0.214 | 10.8 | 0.347 | 0.724 | -0.27 | -- | 3.6 | 0.206 | 21.8 | 29.6 | 3577 | -- | -- |
| 22.19 | 0.219 | 10.8 | 1.03 | 0.733 | 0.147 | -- | -- | 0.298 | 21.8 | 29.7 | 4307 | -- | -- |
| 51.38 | 0.336 | 10.7 | 1.07 | -- | 0.25 | -- | -0.245 | 0.335 | -- | 29.2 | 3644 | -- | -- |
| 22.96 | 0.225 | 10.7 | 0.993 | 0.731 | -- | 0.0147 | -- | 0.314 | 21.7 | -- | -- | -- | -- |
| 22.97 | 0.224 | 10.7 | 0.993 | 0.731 | -- | -- | -- | 0.314 | 21.7 | -- | -- | -- | -- |
| 51.44 | 0.336 | 10.7 | 1.04 | -- | 0.236 | -- | -- | 0.327 | -- | 29.2 | 3644 | -- | -- |
| 36.8 | 0.283 | 10.8 | -- | 0.68 | -0.545 | -- | -- | 0.097 | 22.1 | 33.6 | 47520 | -- | -- |
| 54.69 | 0.346 | 10.7 | 0.999 | -- | -- | -- | -- | 0.313 | -- | -- | -- | -- | -- |
| 48.93 | 0.327 | 10.8 | -- | 0.733 | -- | -- | -- | 0.203 | 21.8 | -- | -- | -- | -- |
| 65.67 | 0.377 | 10.8 | -- | -- | -0.528 | -- | -- | 0.213 | -- | 35.03 | 47520 | -- | -- |
| 81.03 | 0.42 | 10.8 | -- | -- | -- | -- | -- | 0.202 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.54 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 2 | 20.71 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 3 | 20.72 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 4 | 20.78 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 5 | 20.79 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 16 | 3 |
| 6 | 20.79 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 7 | 20.80 | temperature | 25.0 | 720 | < th | dose independent | rect. | 15 | 6 |
| 8 | 20.80 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 9 | 20.81 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 15 | 20.84 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 16 | 20.84 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 14 |
| 17 | 20.85 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 28 | 20.87 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 7 |
| 30 | 20.88 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 31 | 20.88 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 40 | 20.89 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 44 | 20.90 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 45 | 20.90 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 46 | 20.90 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 48 | 20.90 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 65 | 20.91 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 88 | 20.94 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 14 | 1 |
| 92 | 20.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 93 | 20.95 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 109 | 20.95 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 111 | 20.96 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 112 | 20.96 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 114 | 20.97 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 115 | 20.97 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 129 | 20.99 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 130 | 20.99 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 131 | 20.99 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 144 | 21.00 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 150 | 21.00 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 13 |
| 154 | 21.00 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 155 | 21.00 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 161 | 21.01 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 199 | 21.02 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 204 | 21.03 | radiation | 40.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 212 | 21.03 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 250 | 21.04 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 7 |
| 266 | 21.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 291 | 21.06 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 295 | 21.06 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 302 | 21.06 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 306 | 21.06 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 5 |
| 311 | 21.06 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 17 | 14 |
| 317 | 21.07 | radiation | 10.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 319 | 21.07 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 328 | 21.07 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 7 |
| 358 | 21.07 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 362 | 21.08 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 366 | 21.08 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 373 | 21.08 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 423 | 21.10 | humidity | 50.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 441 | 21.10 | temperature | 25.0 | 720 | > th | dose independent | rect. | 14 | 11 |
| 447 | 21.10 | atmosphere | 1005.0 | 43200 | < th | dose dependent | sin | 21 | NA |
| 450 | 21.10 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 451 | 21.10 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 470 | 21.10 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 12 | 7 |
| 502 | 21.11 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 527 | 21.11 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 18 | 6 |
| 556 | 21.12 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 591 | 21.12 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 596 | 21.12 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 8 |
| 618 | 21.13 | humidity | 50.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 628 | 21.13 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 638 | 21.13 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 12 | 14 |
| 644 | 21.13 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 12 | 20 |
| 647 | 21.13 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 654 | 21.13 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 7 | 4 |
| 659 | 21.13 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 693 | 21.14 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 704 | 21.14 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 723 | 21.14 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 736 | 21.14 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 766 | 21.14 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 14 | 16 |
| 784 | 21.15 | wind | 3.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 786 | 21.15 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 787 | 21.15 | wind | 1.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 849 | 21.15 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 861 | 21.15 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 5 |
| 897 | 21.15 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 910 | 21.15 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 15 | 18 |
| 927 | 21.16 | temperature | 25.0 | 720 | > th | dose independent | sin | 16 | NA |
| 929 | 21.16 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 930 | 21.16 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 939 | 21.16 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 961 | 21.16 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 975 | 21.16 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 3 |