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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0805300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.36 (0.0315) R2 : 0.165
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.698 (0.0775) R2dC : 0.149 R2C : 0.141
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.209 (0.0663) R2dN8 : 0.0236 R2N8 : 0.0158
σ : 0.594
deviance : 161.42
__
_____
C
peak time of C : 14.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
146.92 0.569 3.44 -0.878 0.481 1.11 -0.19 -6.52 0.0666 14.1 26.95 83 -- --
154.12 0.578 3.37 -0.318 0.496 0.543 -0.674 -- 0.146 13.5 25.2 162 -- --
147.02 0.565 3.44 -0.9 0.48 1.11 -- -6.69 0.0603 14.1 26.9 83 -- --
155.05 0.58 3.36 -0.314 0.586 0.526 -- -- 0.196 13.7 28.3 329 -- --
156.46 0.583 3.46 -1.05 -- 1.43 -- -6.43 -0.018 -- 26.02 85 -- --
158.87 0.591 3.36 -0.238 0.693 -- -0.496 -- 0.184 14.4 -- -- -- --
159.75 0.592 3.37 -0.251 0.693 -- -- -- 0.181 14.5 -- -- -- --
167.28 0.602 3.38 -0.413 -- 0.9 -- -- 0.102 -- 25 99 -- --
157.58 0.585 3.35 -- 0.606 0.484 -- -- 0.229 13.7 28.57 335 -- --
188.08 0.641 3.37 -0.281 -- -- -- -- 0.164 -- -- -- -- --
161.42 0.594 3.36 -- 0.698 -- -- -- 0.209 14.5 -- -- -- --
171.67 0.61 3.37 -- -- 0.841 -- -- 0.155 -- 25.1 99 -- --
190.16 0.644 3.36 -- -- -- -- -- 0.195 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 140.86 humidity 70 90 < th dose independent rect. 14 21
2 141.77 humidity 70 30 < th dose independent rect. 14 19
8 142.33 humidity 70 30 < th dose independent sin 12 NA
15 143.20 humidity 80 10 < th dose dependent rect. 14 19
16 143.21 humidity 70 10 > th dose independent sin 12 NA
27 143.63 humidity 80 90 < th dose dependent rect. 14 21
43 144.73 humidity 80 10 < th dose dependent sin 11 NA
57 145.30 humidity 70 90 < th dose independent rect. 14 5
90 145.50 humidity 70 30 > th dose independent sin 16 NA
92 145.55 humidity 50 90 > th dose dependent rect. 17 21
102 145.75 radiation 10 270 < th dose dependent rect. 16 20
122 146.08 humidity 70 30 > th dose independent rect. 9 23
178 146.56 humidity 80 90 < th dose dependent rect. 14 14
201 146.60 humidity 80 90 < th dose dependent rect. 14 10
232 146.74 humidity 60 10 > th dose dependent rect. 17 19
246 146.81 humidity 80 90 < th dose dependent sin 16 NA
285 147.06 humidity 80 90 < th dose dependent rect. 14 5
286 147.06 temperature 25 90 > th dose dependent rect. 14 21
289 147.09 humidity 70 30 < th dose independent rect. 10 23
293 147.11 temperature 25 90 > th dose dependent rect. 12 23
309 147.25 temperature 25 90 > th dose dependent rect. 7 11
312 147.27 radiation 10 720 > th dose independent rect. 17 14
316 147.27 radiation 10 270 < th dose dependent rect. 5 23
329 147.33 humidity 50 90 > th dose dependent sin 19 NA
337 147.36 humidity 70 90 > th dose independent rect. 17 21
342 147.37 humidity 70 90 > th dose independent rect. 9 14
354 147.41 humidity 70 90 > th dose independent rect. 15 23
378 147.55 temperature 25 90 > th dose dependent rect. 8 13
395 147.62 temperature 25 90 > th dose dependent rect. 23 19
404 147.65 temperature 30 270 > th dose independent rect. 13 5
408 147.66 temperature 25 90 > th dose dependent rect. 8 17
421 147.70 humidity 50 270 > th dose dependent rect. 8 12
455 147.83 radiation 10 720 > th dose independent rect. 6 1
462 147.86 humidity 80 30 < th dose dependent rect. 10 23
505 147.93 temperature 25 90 > th dose dependent sin 19 NA
508 147.94 temperature 25 90 > th dose dependent rect. 20 22
513 147.97 humidity 70 90 > th dose independent rect. 17 18
522 148.01 temperature 25 90 > th dose dependent rect. 23 22
551 148.08 humidity 70 90 < th dose independent no NA NA
552 148.08 humidity 70 90 < th dose independent rect. 6 14
639 148.13 humidity 70 30 > th dose independent no NA NA
641 148.13 humidity 70 30 > th dose independent rect. 11 23
695 148.22 humidity 70 90 > th dose independent rect. 11 12
713 148.25 humidity 70 30 > th dose independent rect. 13 23
728 148.28 humidity 70 90 > th dose independent rect. 17 14
731 148.28 humidity 50 90 > th dose dependent rect. 11 12
769 148.32 humidity 90 90 < th dose dependent rect. 23 22
772 148.33 temperature 25 90 > th dose dependent no NA NA
780 148.35 temperature 30 90 < th dose independent rect. 17 14
817 148.40 humidity 90 90 < th dose dependent rect. 23 20
822 148.41 radiation 10 270 < th dose dependent no NA NA
825 148.42 temperature 30 270 > th dose independent sin 17 NA
833 148.43 humidity 90 90 < th dose dependent rect. 6 19
848 148.47 humidity 90 90 < th dose dependent rect. 6 22
856 148.49 humidity 90 90 < th dose dependent rect. 2 23
889 148.54 humidity 90 90 < th dose dependent rect. 6 13
894 148.55 humidity 50 270 > th dose independent rect. 15 23
933 148.62 humidity 90 90 < th dose dependent rect. 20 23
934 148.63 humidity 70 30 > th dose independent rect. 6 23
936 148.63 humidity 90 90 < th dose dependent no NA NA
940 148.64 humidity 90 90 < th dose dependent rect. 3 16
993 148.72 humidity 70 90 > th dose independent rect. 1 23